Jatropha Genome Database
- JcCA0020841.50
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020841.50 - phase: 0
(1467 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04604 1752 0.0
KJC_c07913 989 0.0
KJC_c03580 74 1e-12
>KJC_c04604
Length = 909
Score = 1752 bits (884), Expect = 0.0
Identities = 908/912 (99%), Gaps = 3/912 (0%)
Strand = Plus / Minus
Query: 538 catgatctgaatgcctatagaattgtttttgatgatgagggtaatcccagactttcatgc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 catgatctgaatgcctatagaattgtttttgatgatgagggtaatcccagactttcatgc 850
Query: 598 ttcggtctgatgaagaacagtagagatggaaaaagttatagtacaaacttggcatttact 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ttcggtctgatgaagaacagtagagatggaaaaagttatagtacaaacttggcatttact 790
Query: 658 cctcctgagtatctaaggacaggaagggtaacaccagaaagtgtaatttatagctttggc 717
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cctc-tgagtatctaaggacaggaagggtaacaccagaaagtgtaatttatagctttggc 731
Query: 718 acccttttgcttgaccttctaagtggaaaacatattcctcccagccatgcgttggactta 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 acccttttgcttgaccttctaagtggaaaacatattcctcccagccatgcgttggactta 671
Query: 778 ataagggacaagaatattcagatgctcacagattcttgcttggaaggccaatttacaaat 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ataagggacaagaatattcagatgctcacagattcttgcttggaaggccaatttacaaat 611
Query: 838 gatgatgggactgagttagtgcgattagcctctcgttgtttacagtatgagcctcgtgag 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gatgatgggactgagttagtgcgattagcctctcgttgtttacagtatgagcctcgtgag 551
Query: 898 cggccaaatccaaaatcattagttgctgctttgattcctcttcagaaggatactgaggtt 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cggccaaatccaaaatcattagttgctgctttgattcctcttcagaaggatactgaggtt 491
Query: 958 ccttctcatgttttaatgggtataccagatggtgccgaagctttacctccgtcacccctt 1017
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 490 ccttctcatgttttaatgggtataccagatggtgccgaagctttac-tccgtcacccctc 432
Query: 1018 ggtgaggcttgcttaagaatggacttgactgcgatacatgagatcatggaaaagcttggg 1077
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 431 ggtgaggcttgcttaagaatggacttgactgcgatacatgagatcatggaaa-gcttggg 373
Query: 1078 tataaagatgatgagggtgcagctactgagctctcattccagatgtggaccaatcagatg 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tataaagatgatgagggtgcagctactgagctctcattccagatgtggaccaatcagatg 313
Query: 1138 caggaaacattaaattcaaagaaaaagggtgatgttgccttccggcacaaagattttaga 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caggaaacattaaattcaaagaaaaagggtgatgttgccttccggcacaaagattttaga 253
Query: 1198 gctgccatagaatgctattcccagttcattgatgttgggaccatggtttctccaactgtt 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gctgccatagaatgctattcccagttcattgatgttgggaccatggtttctccaactgtt 193
Query: 1258 tatgcacgccgaagtctatcctatctcatgagcgaaatgcctcaggaagccctgaatgat 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tatgcacgccgaagtctatcctatctcatgagcgaaatgcctcaggaagccctgaatgat 133
Query: 1318 gcagtgcaagctcaagtaatatctcctatttggcatattgcatcctatttacaagcagca 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcagtgcaagctcaagtaatatctcctatttggcatattgcatcctatttacaagcagca 73
Query: 1378 gctctttttgcgttgggaaaggagtgtgaggcacaagcagctctcaaagagggatcaatc 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gctctttttgcgttgggaaaggagtgtgaggcacaagcagctctcaaagagggatcaatc 13
Query: 1438 ctagaaaataaa 1449
||||||||||||
Sbjct: 12 ctagaaaataaa 1
>KJC_c07913
Length = 521
Score = 989 bits (499), Expect = 0.0
Identities = 517/521 (99%), Gaps = 4/521 (0%)
Strand = Plus / Plus
Query: 41 gttctgagtatgatggatcagtccccgaaggtcaaaatgagg---aaaatgaggagagga 97
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gttctgagtatgatggatcagtccccgaaggtcaaaatgaggtagaaaatgaggagagga 60
Query: 98 acgaacttgctgatttgcctgcattccgcgaatacaccattgagacactcaagatggcaa 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgaacttgctgatttgcctgcattccgcgaatacaccattgagacactcaagatggcaa 120
Query: 158 cttctggctttgctgtggagaatatagtttctgaacatggggaaaaggctccaaatgtgg 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttctggctttgctgtggagaatatagtttctgaacatggggaaaaggctccaaatgtgg 180
Query: 218 tttataagggtaagctcgagaatcagaggaggattgctgtaaagcggtttaatagatctg 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttataagggtaagctcgagaatcagaggaggattgctgtaaagcggtttaatagatctg 240
Query: 278 catggcctgatgccagacaatttttggacgaagcaagagctgttggtcagctacggaatc 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catggcctgatgccagacaatttttggacgaagcaagagctgttggtcagctacggaatc 300
Query: 338 ataggctggcaaatttactcggttgttgctgtgaaggagacgagaggctgcttgttgcag 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataggctggcaaatttactcggttgttgctgtgaaggagacgagaggctgcttgttgcag 360
Query: 398 aatttatgcccaatgatacattagcaaaacacttattccattggg-aaacacaacctatg 456
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 aatttatgcccaatgatacattagcaaaacacttattccattgggaaaacacaacctatg 420
Query: 457 aaatgggcgatgcgtcttagggtggctttacatcttgcacaagctctagaatattgcact 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaatgggcgatgcgtcttagggtggctttacatcttgcacaagctctagaatattgcact 480
Query: 517 agtcaagggcgtgctctttatcatgatctgaatgcctatag 557
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtcaagggcgtgctctttatcatgatctgaatgcctatag 521
>KJC_c03580
Length = 1073
Score = 73.8 bits (37), Expect = 1e-12
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 1186 aaagattttagagctgccatagaatgctattcccagttcattgatgttgggaccatggtt 1245
|||||||||| | ||||||| || || |||||||||||||| || || || || ||||||
Sbjct: 428 aaagattttaaaactgccattgactgttattcccagttcatagacgtaggaacaatggtt 369
Query: 1246 tctccaactgtttatgcacgccgaagtct 1274
||||||||||||| |||||| || |||||
Sbjct: 368 tctccaactgtttttgcacggcgcagtct 340
Score = 63.9 bits (32), Expect = 1e-09
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 605 tgatgaagaacagtagagatggaaaaagttatagtacaaacttggcatttactcctcctg 664
|||||||||| || || ||||||||| |||||||||||||| | || | ||||||||||
Sbjct: 1020 tgatgaagaatagcagggatggaaaa-gttatagtacaaaccttgcctacactcctcctg 962
Query: 665 agtatctaaggacaggaagggtaacaccagaaagtgtaatttatagctttgg 716
|||||||||| | ||||| || || || |||||||| || ||||| |||||
Sbjct: 961 agtatctaagaaatggaagagtcacccctgaaagtgttatgtatagttttgg 910