Jatropha Genome Database
- JcCA0020601.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020601.20 + phase: 0
(687 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04803 1237 0.0
>KJC_c04803
Length = 829
Score = 1237 bits (624), Expect = 0.0
Identities = 624/624 (100%)
Strand = Plus / Minus
Query: 64 gatttctccgatttttctctctcttcgccggctcgaaagattcgccgtctggacgcagag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gatttctccgatttttctctctcttcgccggctcgaaagattcgccgtctggacgcagag 770
Query: 124 ttgccgccaataatggaggaagaggaggcagagatgcatcccccagcggtttttgttgga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ttgccgccaataatggaggaagaggaggcagagatgcatcccccagcggtttttgttgga 710
Query: 184 ggtgttgaagagaagcagcagccaatggtggattctggagtaggaaaccaagagagggct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ggtgttgaagagaagcagcagccaatggtggattctggagtaggaaaccaagagagggct 650
Query: 244 attgtggtgttcaagcctgttaaaactaaccctctcttacattcttcatctaatttttca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 attgtggtgttcaagcctgttaaaactaaccctctcttacattcttcatctaatttttca 590
Query: 304 gtctctgtcgattctgacttggtttatggaattaaaagtcaatttcttaggtcaagctgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gtctctgtcgattctgacttggtttatggaattaaaagtcaatttcttaggtcaagctgc 530
Query: 364 aatggtaacataaggttggccgaggaagaaagagaagcaacaaatgaatgcatggcagtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aatggtaacataaggttggccgaggaagaaagagaagcaacaaatgaatgcatggcagtt 470
Query: 424 gttccgtgggttccttcacaggctgctttcgcacgaggcatcgatacctctcaagcagaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gttccgtgggttccttcacaggctgctttcgcacgaggcatcgatacctctcaagcagaa 410
Query: 484 gctccagatctaatggaagccgaacaagttggggaagaaacaatggaaattgaatttgaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gctccagatctaatggaagccgaacaagttggggaagaaacaatggaaattgaatttgaa 350
Query: 544 ggcaacaatactattcaaagcaatgagcttgaatccggtggaatgatgagtgggacccaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ggcaacaatactattcaaagcaatgagcttgaatccggtggaatgatgagtgggacccaa 290
Query: 604 ggcttgcctcaatggcagcaacagcattgtttgataccacagctacctcaaaacacttcc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggcttgcctcaatggcagcaacagcattgtttgataccacagctacctcaaaacacttcc 230
Query: 664 actcctatcacatggttccaatag 687
||||||||||||||||||||||||
Sbjct: 229 actcctatcacatggttccaatag 206