Jatropha Genome Database
- JcCA0020521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020521.10 + phase: 0
(1020 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06426 745 0.0
KJC_c04429 513 e-145
>KJC_c06426
Length = 603
Score = 745 bits (376), Expect = 0.0
Identities = 383/384 (99%), Gaps = 1/384 (0%)
Strand = Plus / Minus
Query: 637 gaggaagaagcgaaaaaggcatataaagctgccagagaggagagtgaccaagctgctgag 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gaggaagaagcgaaaaaggcatataaagctgccagagaggagagtgaccaagctgctgag 544
Query: 697 acagcaatatctgacaaagtttcttctgccctgattaacagagtagatgctatgcttcaa 756
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 543 acagcaatatctgacaaagtttct-ctgccctgattaacagagtagatgctatgcttcaa 485
Query: 757 aagcttgaaaaagaaattgatgatgtggatgctaaaattggggatagatggcgcttgctt 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aagcttgaaaaagaaattgatgatgtggatgctaaaattggggatagatggcgcttgctt 425
Query: 817 gatagggattatgatgggaaagtgactcctgaggaggttgcgtccgctgctatgtaccta 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gatagggattatgatgggaaagtgactcctgaggaggttgcgtccgctgctatgtaccta 365
Query: 877 aaggaccacttggacaaggagggtatccaagaacttataagcaacctctccaaagataga 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aaggaccacttggacaaggagggtatccaagaacttataagcaacctctccaaagataga 305
Query: 937 gaaggaaaaatccttgtggaagatattgtgaaattaggcagtcaaatggaagatgatgat 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gaaggaaaaatccttgtggaagatattgtgaaattaggcagtcaaatggaagatgatgat 245
Query: 997 acagctgaggaaggaaaagcatag 1020
||||||||||||||||||||||||
Sbjct: 244 acagctgaggaaggaaaagcatag 221
>KJC_c04429
Length = 547
Score = 513 bits (259), Expect = e-145
Identities = 259/259 (100%)
Strand = Plus / Plus
Query: 73 cttggattgctttcagtcgaggaaatgcgacaacagttgcgtgattggctggatttgtca 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttggattgctttcagtcgaggaaatgcgacaacagttgcgtgattggctggatttgtca 60
Query: 133 ctgaatcattctgttccatcttctctattgattctttctagggccttctctgtttctgga 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaatcattctgttccatcttctctattgattctttctagggccttctctgtttctgga 120
Query: 193 aaagtcaagccagaggaagctgttcaggccacactttcatctcttccagatgaagtcgtg 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagtcaagccagaggaagctgttcaggccacactttcatctcttccagatgaagtcgtg 180
Query: 253 gatactgttggagttacagcattgccatctgaagattcagtttcagaaaggagaagaaag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatactgttggagttacagcattgccatctgaagattcagtttcagaaaggagaagaaag 240
Query: 313 ttggagttcttagaaatgc 331
|||||||||||||||||||
Sbjct: 241 ttggagttcttagaaatgc 259
Score = 432 bits (218), Expect = e-121
Identities = 225/226 (99%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 394 tctgttggtagccaaaaggatgtggctttagaagagatgactcttcccaccgctagggaa 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tctgttggtagccaaaaggatgtggctttagaagagatgactcttcccaccgctagggaa 381
Query: 454 gcacaagaacaagcaagagcaaaaacactggagaaacatgagcagctttgtgagctcagt 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gcacaagaacaagcaagagcaaaaacactggagaaacatgagcagctttgtgagctcagt 441
Query: 514 cgtgcattagctgttctggcttctgcatcttctgtcagcagggagcgtgaagaattcctg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cgtgcattagctgttctggcttctgcatcttctgtcagcagggagcgtgaagaattcctg 501
Query: 574 aaacttgtt-aagaaggagatagacctgtacaacagtatggtggac 618
||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 502 aaacttgttaaagaaggagatagacctgtacaacagtatggtggac 547