Jatropha Genome Database

JcCA0019701.60
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0019701.60 + phase: 0 /pseudo
         (281 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05692                                                            351   6e-97

>KJC_c05692 
          Length = 826

 Score =  351 bits (177), Expect = 6e-97
 Identities = 177/177 (100%)
 Strand = Plus / Minus

                                                                       
Query: 88  cgatgcggccataccttaacggctgttgctgcaaccaactctcatggacctcgtctcatt 147
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 cgatgcggccataccttaacggctgttgctgcaaccaactctcatggacctcgtctcatt 767

                                                                       
Query: 148 ctattcggtggcgctaccgcaattgagggcggcggttcttcttccgcccctggcatcaga 207
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ctattcggtggcgctaccgcaattgagggcggcggttcttcttccgcccctggcatcaga 707

                                                                    
Query: 208 ttggcgggagtcaccaattcagttcattcttacgacgttctcactaggaaatggacc 264
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ttggcgggagtcaccaattcagttcattcttacgacgttctcactaggaaatggacc 650