Jatropha Genome Database
- JcCA0019181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0019181.10 - phase: 0
(1512 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02434 731 0.0
KJC_c06912 416 e-116
>KJC_c02434
Length = 1108
Score = 731 bits (369), Expect = 0.0
Identities = 916/1085 (84%), Gaps = 10/1085 (0%)
Strand = Plus / Minus
Query: 187 ttggccaaaaaat-acggaccggtaatgagtattaaacttggtcagcatccttatcttgt 245
||||||||||| | ||||||| |||||| || || ||||||| || ||||| |||||
Sbjct: 1080 ttggccaaaaacttacggacctgtaatgggtgttcaacttgggcaagttcctttccttgt 1021
Query: 246 tgtttcttcgccggaaacagccaaagaagtaatgagaacccaagatcccattttcgctga 305
|| || |||||||||||||| ||||||||||||| || ||||||||| |||| || ||
Sbjct: 1020 cgtgtcctcgccggaaacagctaaagaagtaatgaaaatacaagatcccgtttttgcaga 961
Query: 306 tcgaccgcttgtccttgcgggagaattagtgctttacaaccgaaatgacataggttttgg 365
||||||||||||||||| |||||| |||||||||| |||||||||||||| | ||||||
Sbjct: 960 acgaccgcttgtccttgcaggagaaatagtgctttataaccgaaatgacatcgtttttgg 901
Query: 366 gctgtacggagatcaatggagacaaatgagaaaattttgcgcattggaattacttagcac 425
| |||||||||||| ||||| |||||||||||||||||| | |||||||||||||||||
Sbjct: 900 gtcgtacggagatcagtggaggcaaatgagaaaattttgcacgttggaattacttagcac 841
Query: 426 aaaacgagtacagtcgtttcgatccgtaagagaagaagaaattgcagagtttgtaaaatc 485
|||||||||||||||||| ||| |||| |||||||||||| ||||| ||||||||| |
Sbjct: 840 aaaacgagtacagtcgttccgacccgtgagagaagaagaagttgcatcttttgtaaaaac 781
Query: 486 tc-tgcgatcaaaagaaggaagttctgttaatctgagtcatactttatttgctttaacaa 544
| |||| |||| |||||| | |||||||||| | |||| ||||||| ||||||||||
Sbjct: 780 ttatgcgtacaaagaaaggaactcctgttaatcttactcatgctttatt-gctttaacaa 722
Query: 545 actctataattgcaagaaatactgtcggccataaaagcaaaaatcaagaagcgttgctga 604
| |||||| ||||||||||| |||| || |||||||||||||| ||||| ||||| | |
Sbjct: 721 attctatagttgcaagaaatgctgttggtcataaaagcaaaaaccaaga-gcgttagtta 663
Query: 605 aaa-ttattgatgatatagttgagtcactgggaggtctcagtacagttgatatctttcct 663
|| |||||||||| ||||||| ||| | ||||| | |||| ||||||||||||||||
Sbjct: 662 gaagttattgatgacatagttgtatcag-gagaggtgttagtatagttgatatctttcct 604
Query: 664 tccttaaaatggctaccttcagtcaaaagggaaaggtcaagaatttggaaattgcattgt 723
||| | ||||||| ||| | | ||| |||||||| ||||||||||||||||||||
Sbjct: 603 ccct-acaatggcttcctactgccaagagggaaagatcaagaatttggaaattgcaccaa 545
Query: 724 gaaacagatgagattcttgaaggtatcttagaagagcataaagcgaacaggcaggccgca 783
| |||||||||||||| |||| ||||||| ||||||||| ||| || || ||||| ||
Sbjct: 544 aatacagatgagattctcgaagatatcttacaagagcatagagctaa-agacaggcgaca 486
Query: 784 gctttcaagaacgacgatgggagccaagctgataatcttcttgatgttcttttggatctt 843
|||| |||||| ||| ||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 485 gcttccaagaattgggataggagcgaagctgataatcttcttgatgt-cttttggatctt 427
Query: 844 cagcaaaatggaaatcttgaagttcctttaactgacgtcaacatcaaagcagtaatcctt 903
|| || | ||||||||||| || ||||||||||| ||| ||||||||||| ||| ||
Sbjct: 426 caacagagcggaaatcttgatgt-cctttaactgatgtcgccatcaaagcagcaattatt 368
Query: 904 ggtatgtttggcgctggaagcgacacatcctccaaaacaacagaatgggcaatggcggag 963
| ||||||||| |||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 367 gatatgtttggtgctggaagcgacacatcctcaaaaactgcagaatgggcaatggctgag 308
Query: 964 ttgatgaaaaatccggaaataatgaaaaaggcacaagaagaattgcggagtttgtttggt 1023
||||||| ||||| ||| ||||||| || ||||||||||||||||||| ||| ||||||
Sbjct: 307 ttgatgaggaatccagaagtaatgaagaaagcacaagaagaattgcggaatttctttggt 248
Query: 1024 gaaagtggatacgttgatgaagcaaaacttcacgaaataaaatggttgaagttaattatt 1083
|||| |||| | ||||| |||||||||||||||||| |||||||| | ||||||||||||
Sbjct: 247 gaaaatggaaaggttgaggaagcaaaacttcacgaattaaaatggataaagttaattatt 188
Query: 1084 aatgaaacattgagattacatcctgcagttacattaattccaaggctttgcagggaaaag 1143
|| |||||||||||||||||||||||||| | ||||||||||| |||| |||||||||
Sbjct: 187 aaagaaacattgagattacatcctgcagtggctgtaattccaagggtttgtagggaaaag 128
Query: 1144 accaaagttagtggatatgacgtttatcctaatactagggttttcataaatacatgggca 1203
|| |||||| ||||||||||||| | ||| ||| |||||||||| || ||| ||
Sbjct: 127 actaaagtttatggatatgacgttgagcctggcactcgggttttcattaacgtgtggtca 68
Query: 1204 atcggaagagatcctacaatttggagtgaacctgagaaattcgttccggagagatttatt 1263
|||||||||||||||| | ||||||||||| |||||| |||| |||||||||||||||
Sbjct: 67 atcggaagagatcctaaagtttggagtgaagctgagagattcaagccggagagatttatt 8
Query: 1264 gatag 1268
|||||
Sbjct: 7 gatag 3
>KJC_c06912
Length = 550
Score = 416 bits (210), Expect = e-116
Identities = 396/458 (86%)
Strand = Plus / Plus
Query: 1037 ttgatgaagcaaaacttcacgaaataaaatggttgaagttaattattaatgaaacattga 1096
|||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||| |||
Sbjct: 13 ttgaggaagcaaaacttcaggaattaaaatggttgaagttaattattaaagaaacaatga 72
Query: 1097 gattacatcctgcagttacattaattccaaggctttgcagggaaaagaccaaagttagtg 1156
|| ||||||||| | || || || |||||||| |||| ||||||||||| ||||||||||
Sbjct: 73 gactacatcctgtactttcagtacttccaagggtttgtagggaaaagactaaagttagtg 132
Query: 1157 gatatgacgtttatcctaatactagggttttcataaatacatgggcaatcggaagagatc 1216
|||| || ||||||||| ||||| | ||| | | ||| ||||||| | ||||||||||
Sbjct: 133 gatacgatgtttatcctgatactcgagttctggtcaatgtatgggcacttggaagagatc 192
Query: 1217 ctacaatttggagtgaacctgagaaattcgttccggagagatttattgatagttcaattg 1276
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 193 ctacagtttggagtgaacctgagaaattcaatccggagagatttattgatagttcaatcg 252
Query: 1277 attataggggcaaccattttgaatatactccatttggtgcaggaagaagaatatgccctg 1336
||||| ||| || |||||||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 253 attatttgggtaatcattttgaatatcttccatttggtgcaggaaaaagagtatgccctg 312
Query: 1337 gaatggcattcggtatggttaatctagagattttccttgcaaatttgctatatcattttg 1396
|||| || || ||||||||| || | || | |||||||||||||||||| | ||||||||
Sbjct: 313 gaattgcgttaggtatggttcatatggaaaatttccttgcaaatttgctctttcattttg 372
Query: 1397 actggaaacttcctaaaggaataacttcggagaatcttgacatgactgagaattttggag 1456
|||||||| ||||||||||||||||| | ||||||||||||||||| || ||||||||
Sbjct: 373 actggaaatttcctaaaggaataactgcagagaatcttgacatgaccgatgcttttggag 432
Query: 1457 gagttatcaaaagaaaacaagaccttgaattgattccc 1494
||||||| || |||||| ||||||||| ||||||||
Sbjct: 433 gagttatgaagagaaaagttgaccttgaactgattccc 470