Jatropha Genome Database
- JcCA0015901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0015901.10 + phase: 2 /partial
(1759 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05769 1366 0.0
KJC_c12795 94 1e-18
>KJC_c05769
Length = 761
Score = 1366 bits (689), Expect = 0.0
Identities = 744/764 (97%), Gaps = 3/764 (0%)
Strand = Plus / Plus
Query: 856 gtctataaatagtgatgaattgaagaatcccgatgcttctagtgctataggaatgcagat 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctataaatagtgatgaattgaagaatcccgatgcttctagtgctataggaatgcagat 60
Query: 916 acttcaaaagagaatctctcttgagagaaatgaatctggtctatctttggatggaagtat 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttcaaaagagaatctctcttgagagaaatgaatctggtctatctttggatggaagtat 120
Query: 976 tgtcagtgaaattgagggagaaactgtggttgatagactgaataggcagattgagcatga 1035
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtcagtgaaattgagg-agaaactgtggttgatagactgaataggcagattgagcatga 179
Query: 1036 taaaaaattgttaattgctttgtacaaggaattggaagaagaaagaaatgcatctgcaat 1095
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 taaaa-attgttaattgctttgtacaaggaattggaagaagaaagaaatgcatctgcaat 238
Query: 1096 tgctgcaaatcaagcaatggccatgattactagattgcaggaagagaaggcaacactcca 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgctgcaaatcaagcaatggccatgattactagattgcaggaagagaaggcaacactcca 298
Query: 1156 aatggaagccttgcagtgcctgagaatgatggaagaacaagctgaatatgacatggaaac 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aatggaagccttgcagtgcctgagaatgatggaagaacaagctgaatatgacatggaaac 358
Query: 1216 cctgcaaaagacgaatgaccttcttgcnnnnnnnnnnnnnnnnnttcaagatctagaagc 1275
||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 359 cctgcaaaagacgaatgaccttcttgcagagagagagaaagagattcaagatctagaagc 418
Query: 1276 agaccttgaattttataggaacaactaccaaagtgaatcattattacaggataccataga 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agaccttgaattttataggaacaactaccaaagtgaatcattattacaggataccataga 478
Query: 1336 acaaaatgatatcaaagaggagcacccagaagctagttctgtcaagattagtaccaaaac 1395
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ac-aaatgatatcaaagaggagcacccagaagctagttctgtcaagattagtaccaaaac 537
Query: 1396 tagaaaatctgttactgaaaaacaagatatctcctataatgttgaaggaataaatatgtc 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tagaaaatctgttactgaaaaacaagatatctcctataatgttgaaggaataaatatgtc 597
Query: 1456 agctggggataagagtagagatactctgaagaattcattgctagattttgaggatgaaag 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 agctggggataagagtagagatactctgaagaattcattgctagattttgaggatgaaag 657
Query: 1516 ctcagacattttacactgcttgaagaaattggaaaagaggctttgtctgttctctaataa 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctcagacattttacactgcttgaagaaattggaaaagaggctttgtctgttctctaataa 717
Query: 1576 tcaactagacttcgctaacagtgaatattctggaaacacagaag 1619
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tcaactagacttcgctaacagtgaatattctggaaacacagaag 761
>KJC_c12795
Length = 630
Score = 93.7 bits (47), Expect = 1e-18
Identities = 116/139 (83%)
Strand = Plus / Minus
Query: 1068 tggaagaagaaagaaatgcatctgcaattgctgcaaatcaagcaatggccatgattacta 1127
|||| |||||||| | ||| ||||||||||||||||| ||| | ||||| ||||| | ||
Sbjct: 608 tggaggaagaaaggagtgcttctgcaattgctgcaaaccaaactatggcaatgataaata 549
Query: 1128 gattgcaggaagagaaggcaacactccaaatggaagccttgcagtgcctgagaatgatgg 1187
| | || |||||||||||| || | ||||||||||| ||||| | || ||||||||||
Sbjct: 548 ggcttcaagaagagaaggcagcaatgcaaatggaagcattgcaataccaaagaatgatgg 489
Query: 1188 aagaacaagctgaatatga 1206
|||||||| ||||||||||
Sbjct: 488 aagaacaatctgaatatga 470