Jatropha Genome Database
- JcCA0009731.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0009731.10 + phase: 0 /partial
(1188 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02270 276 1e-73
>KJC_c02270
Length = 1615
Score = 276 bits (139), Expect = 1e-73
Identities = 485/599 (80%), Gaps = 1/599 (0%)
Strand = Plus / Minus
Query: 271 agtgcttacatcataaagaagttatattttggaaggcactctactgatcgtgaagttgct 330
|||||||||||||| || |||||||||||||| |||||||| || |||||||| |||||
Sbjct: 838 agtgcttacatcatcaaaaagttatattttggcaggcactcaacagatcgtgagtttgct 779
Query: 331 ctgatgattctcatggcttatctttcatatattatggctgaactgttcaatttaagtgcc 390
|| ||||| |||||||| || ||||||||||| | |||||||||||| |||| |||| |
Sbjct: 778 ctcatgatgctcatggcatacctttcatatatgttagctgaactgttctatttgagtggc 719
Query: 391 atcctcactgtgtttttctgtgggattgtcatgtctcactacacctggcataatgtaact 450
|| ||||| || ||||||||||||||||| ||||| || ||||||||||| ||||| |||
Sbjct: 718 attctcacagtatttttctgtgggattgtgatgtcccattacacctggcacaatgtgact 659
Query: 451 gaaagttcaagagtcactaccaaacattcttttgcaacattgtcatttattgcagaaatt 510
|| |||||||||||||||||||| ||| ||||||||||| |||||||| |||| || |||
Sbjct: 658 gagagttcaagagtcactaccaagcatgcttttgcaacaatgtcatttgttgctgagatt 599
Query: 511 tacatatttctctatgttggtatggatgctttggacatggagaagtggaaaattgtgagc 570
| || ||||| ||||||||||||||||| ||||| || || ||||||| | |||| ||
Sbjct: 598 tttatctttctttatgttggtatggatgccttggatattgaaaagtggagatttgtcagt 539
Query: 571 aagagtcctggtacttcagttggtgtgagttcaattcttcttgggctagttctgattgga 630
| || ||||| |||||||||| || |||||| | | |||| || ||| ||||||||
Sbjct: 538 gacagccctggaacttcagttgcagttagttcagtattacttgcacttgttatgattgga 479
Query: 631 agagctgcttttatattccctttatcttttatatccaacctgaccaggaagtctcaaggt 690
||||| || ||| | ||||| ||||| || ||||||||| | | ||||| || || |
Sbjct: 478 agagcagc-tttgttttccccttatccttcatatccaacttatctaggaaatcacagact 420
Query: 691 gacaaaattggattaaagcagcaggttgtaatatggtgggctgggctcatgcgaggagct 750
|| || || | || |||||||| |||| || ||||||||||| || ||| |||| ||
Sbjct: 419 gagaagatcagcttcaagcagcaaattgtgatctggtgggctggtctaatgagaggtgca 360
Query: 751 gtatctatggcacttgcttataatcagtttacccagtcagggcatacccaactgcctgga 810
|| || ||||||||||| |||||| ||||||| | || ||||| || ||| ||
Sbjct: 359 gtttcaatggcacttgcatataataagtttacaagcttgggccatactcatttgcgaggg 300
Query: 811 aatgcgatcatgataaccagcaccatcacggttgttctttttagtactgtggtattcgg 869
||||| || ||||| ||||||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 299 aatgccataatgattaccagcaccataactgttgttcttttcagtactgtggtgttcgg 241
Score = 99.6 bits (50), Expect = 2e-20
Identities = 116/138 (84%)
Strand = Plus / Minus
Query: 25 gcaatattttctgccacagattctgtttgcaccttgcaggtgcttgatcaggaagaaaca 84
||||||||| | || |||||||| |||||||| |||||||||||| ||||||| || |||
Sbjct: 1084 gcaatatttgcagcaacagattcagtttgcacattgcaggtgcttaatcaggatgagaca 1025
Query: 85 cctttgctatacagtctagtctttggggaaggtgtggtaaatgatgccacagttgttgtg 144
|| || ||||| ||| |||| ||||| || ||||| ||||||||||| ||| || |||
Sbjct: 1024 cccttactatatagtttagtatttggagagggtgttgtaaatgatgcgacatcagtagtg 965
Query: 145 cttttcaatgcgatccag 162
||||||||||| ||||||
Sbjct: 964 cttttcaatgcaatccag 947