Jatropha Genome Database
- JcCA0009561.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0009561.20 - phase: 0 /TE/partial
(3384 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11255 906 0.0
>KJC_c11255
Length = 749
Score = 906 bits (457), Expect = 0.0
Identities = 501/509 (98%), Gaps = 5/509 (0%)
Strand = Plus / Plus
Query: 276 gggctgcctcaactacagaaagccaactgacggtgaaagatacgtctatgtgggaaatgg 335
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 240 gggctgcctcaactacagaaagccagctgacggtgaaagatacgtctatgtgggaaatgg 299
Query: 336 cgatctggttgaagtagaggcaattggacattttagattatgtttaagtactggctattt 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cgatctggttgaagtagaggcaattggacattttagattatgtttaagtactggctattt 359
Query: 396 tttggatcttatagatacttttgttattccctcttttagaaggaatttgatttctgtttc 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tttggatcttatagatacttttgttattccctcttttagaaggaatttgatttctgtttc 419
Query: 456 ctttttggacaaatctggttttcattgttcttttggagacagtatattcactttatctat 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ctttttggacaaatctggttttcattgttcttttggagacagtatattcactttatctat 479
Query: 516 gaattcaaaagttttgggtactggttgcttgaatgaatgtgataatctatatatgttaga 575
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaattc-aaagttttgggtactggttgcttgaatgaatgtgataatctatatatgttaga 538
Query: 576 cattgatactagttatcatgaatccctgcatgttactacaagaggtaccaaaagaaagtt 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cattgatactagttatcatgaatccctgcatgttactacaagaggtaccaaaagaaagtt 598
Query: 636 gaatattgataactcagttgtactttggcatagacgtttgggtcatgtatccaaatcaag 695
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gaatattgataactcagctgtactttggcatagacgtttgggtcatgtatccaaatcaag 658
Query: 696 aattgagcgtcttgtttttgatggtatcttagatacacttgattacac-aggtttgg-at 753
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 659 aattgagcgtcttgtttctgatggtatcttagatacacttgattacactaggtttggtat 718
Query: 754 tc-ttgta-ttgagtgtattaaaggaaaa 780
|| ||||| ||||||||||||||||||||
Sbjct: 719 tctttgtatttgagtgtattaaaggaaaa 747
Score = 250 bits (126), Expect = 2e-65
Identities = 129/130 (99%)
Strand = Plus / Plus
Query: 144 gagaaacctgctgctgctactgctgaagatccagtacaaaagaagccttatgtgccaaaa 203
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gagaaacctgctgctgctactgctgtagatccagtacaaaagaagccttatgtgccaaaa 60
Query: 204 tgcttcttttgtggaaagacggatcacttgagaaaggactgtcctaaatttgctatttgg 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcttcttttgtggaaagacggatcacttgagaaaggactgtcctaaatttgctatttgg 120
Query: 264 cttgcaaaga 273
||||||||||
Sbjct: 121 cttgcaaaga 130