Jatropha Genome Database
- JcCA0008021.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0008021.20 + phase: 0
(972 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05445 1485 0.0
>KJC_c05445
Length = 826
Score = 1485 bits (749), Expect = 0.0
Identities = 763/765 (99%), Gaps = 2/765 (0%)
Strand = Plus / Minus
Query: 208 gaccaggttgtggacagtaaaattctgcagtactgtagcatagacaggaaagagaaaagg 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gaccaggttgtggacagtaaaattctgcagtactgtagcatagacaggaaagagaaaagg 767
Query: 268 tcaataggtgaaatggagcaggagtttcttcaagcattacaatcattttattatgaggga 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tcaataggtgaaatggagcaggagtttcttcaagcattacaatcattttattatgaggga 707
Query: 328 aaagctataatgtcaaatgaagaatttgataatctcaaggaagaactaatgtgggaagga 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aaagctataatgtcaaatgaagaatttgataatctcaaggaagaactaatgtgggaagga 647
Query: 388 agcagtgttgttatgctaagttctgatgagcagaagtttctggaagcttcaatggcttat 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 agcagtgttgttatgctaagttctgatgagcagaagtttctggaagcttcaatggcttat 587
Query: 448 gtatccgggaaaccaattttgagtgatcaagaatttgacgagttgaagatgagactaaag 507
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 586 gtatccgggaaaccaattt-gagtgatcaagaatttgacgagttgaagatgag-ctaaag 529
Query: 508 caagaaggtagtgaaatcgtagttgagggtcctcgatgcagtcttcgtagtagaaaggtt 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 caagaaggtagtgaaatcgtagttgagggtcctcgatgcagtcttcgtagtagaaaggtt 469
Query: 568 tacagtgacctgtctgttgactatttaaagatgttcctgttgtatgtccctgcaactgtt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tacagtgacctgtctgttgactatttaaagatgttcctgttgtatgtccctgcaactgtt 409
Query: 628 gttgcattaggcttgtttttcttcttggatgatttgactggatttgaaataacatatctt 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gttgcattaggcttgtttttcttcttggatgatttgactggatttgaaataacatatctt 349
Query: 688 ctggagcttccagaaccattcagcttcatcttcacatggttcgctgcggtgccattaata 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ctggagcttccagaaccattcagcttcatcttcacatggttcgctgcggtgccattaata 289
Query: 748 gtctggttagctcagtctttcacaaatgcaattgtaaaagactttttgatcttgaagggc 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gtctggttagctcagtctttcacaaatgcaattgtaaaagactttttgatcttgaagggc 229
Query: 808 ccttgtcccaactgcggtaccgaaaacctctccttcttcggaaccattctttcagtttca 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ccttgtcccaactgcggtaccgaaaacctctccttcttcggaaccattctttcagtttca 169
Query: 868 agcggtggtgtaaccaacatggtcaagtgctcaaattgtggaactgatatggagtatgac 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 agcggtggtgtaaccaacatggtcaagtgctcaaattgtggaactgatatggagtatgac 109
Query: 928 tcgaagacacgattgattacactgccagaaggaagcaatgcttga 972
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tcgaagacacgattgattacactgccagaaggaagcaatgcttga 64