Jatropha Genome Database
- JcCA0008021.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0008021.10 - phase: 0
(1068 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11539 1388 0.0
>KJC_c11539
Length = 729
Score = 1388 bits (700), Expect = 0.0
Identities = 728/732 (99%), Gaps = 4/732 (0%)
Strand = Plus / Plus
Query: 62 caaaagaatacattcgtccaaaagaagagctaacaagcatcggcaacgtcttcgaagagg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaagaatacattcgtccaaaagaagagctaacaagcatcggcaacgtcttcgaagagg 60
Query: 122 agaaaaaagaagaagggcctcaggttccaaccattgatttgaaagaagtggattctgaag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaaaagaagaagggcctcaggttccaaccattgatttgaaagaagtggattctgaag 120
Query: 182 atgaagttgttcgcgagaaatgcagagcagagttcataaaagctgccaaggaatggggag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgaagttgttcgcgagaaatgcagagcagagttcataaaagctgccaaggaatggggag 180
Query: 242 ttatgcatttggttaaccatggaatttctgaccaacttattgaacgcgttaagaaagctg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttatgcatttggttaaccatggaatttctgaccaacttattgaacgcgttaagaaagctg 240
Query: 302 gagaagctttcttcgatcaacctatggaggaaaaagaaaaatatgcaaatgatcaggctt 361
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 gagaagctttcttcgatcaacctatggaggaaaaag-aaaatatgcaaatgatcaggctt 299
Query: 362 cagggaaaatccaaggctatggcagtaagcttgctaataatgctagtgggcagctagagt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cagggaaaatccaaggctatggcagtaagcttgctaataatgctagtgggcagctagagt 359
Query: 422 gggaggattatttcttccatcttatttatcctgaagacaaacgcgacttgtctatttggc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gggaggattatttcttccatcttatttatcctgaagacaaacgcgacttgtctatttggc 419
Query: 482 ctaaaactccctctgactacatagcggcgaccagtgagtatgcgaggcaactaagagcac 541
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ct-aaactccctctgactacatagcggcgaccagtgagtatgcgaggcaactaagagcac 478
Query: 542 tagctaccaaaatgctgtcagtactatcacttggcttaggactagaagaaggaagactag 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tagctaccaaaatgctgtcagtactatcacttggcttaggactagaagaaggaagactag 538
Query: 602 aaaaagaagttggtgggcttgaagagcttcttcttcaaatgaagattaactattacccta 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 -aaaagaagttggtgggcttgaagagcttcttcttcaaatgaagattaactattacccta 597
Query: 662 aatgcccacagccagaacttgctctaggagttgaagcacacactgacgttagtgctctca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aatgcccacagccagaacttgctctaggagttgaagcacacactgacgttagtgctctca 657
Query: 722 ctttcatcct-ccacaatatggtgcctggcctgcaactcttctacgaaggcaagtgggtc 780
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctttcatcctcccacaatatggtgcctggcctgcaactcttctacgaaggcaagtgggtc 717
Query: 781 actgcaaaatgc 792
||||||||||||
Sbjct: 718 actgcaaaatgc 729