Jatropha Genome Database
- JcCA0007981.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0007981.10 - phase: 0
(777 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11823 1344 0.0
KJC_c07260 72 2e-12
>KJC_c11823
Length = 931
Score = 1344 bits (678), Expect = 0.0
Identities = 699/702 (99%), Gaps = 3/702 (0%)
Strand = Plus / Plus
Query: 78 tattcttttagg-attttttg-ataattatagattgcataccaaacaagacgaggatgag 135
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tattcttttaggtattttttgtataattatagattgcataccaaacaagacgaggatgag 133
Query: 136 aaaaatttagtctctaaatccactgttttcaagggcgttcttctccagcagtctatccaa 195
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aaaa-tttagtctctaaatccactgttttcaagggcgttcttctccagcagtctatccaa 192
Query: 196 gctgttgttgctattctcttgtttacggtaactggaaatgattctcaagctgatacatat 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gctgttgttgctattctcttgtttacggtaactggaaatgattctcaagctgatacatat 252
Query: 256 ccacagccttccttaattgttctagcaagacaatttgttacagcaatgttggttatggat 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ccacagccttccttaattgttctagcaagacaatttgttacagcaatgttggttatggat 312
Query: 316 acttggcagtatttcatgcatagatacatgcatcacaacaaatttctgtataagcatatt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acttggcagtatttcatgcatagatacatgcatcacaacaaatttctgtataagcatatt 372
Query: 376 cattctcaacatcatcggcttgttgtcccatatgcatttggggctctatacaatcatcca 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cattctcaacatcatcggcttgttgtcccatatgcatttggggctctatacaatcatcca 432
Query: 436 ctagaggggcttctgcttgacacaatcggtggggctttatcttttctcatgtcaggcatg 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctagaggggcttctgcttgacacaatcggtggggctttatcttttctcatgtcaggcatg 492
Query: 496 tctcctagatcctccattttctttttctcctttgctaccattaaaacagtggatgaccat 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tctcctagatcctccattttctttttctcctttgctaccattaaaacagtggatgaccat 552
Query: 556 tgtgggttatggcttcctgggaatctcttccacgtgttctttaaaaacaatactgcttac 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgtgggttatggcttcctgggaatctcttccacgtgttctttaaaaacaatactgcttac 612
Query: 616 catgatgttcatcatcaactgtacggtagcaaatacaacttttcacagccattctttgtt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 catgatgttcatcatcaactgtacggtagcaaatacaacttttcacagccattctttgtt 672
Query: 676 atgtgggatagaatccttggaacttatatgccttattcacttgagaagaaagaaggcggt 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 atgtgggatagaatccttggaacttatatgccttattcacttgagaagaaagaaggcggt 732
Query: 736 ggctttgaagtacgacctactaaagagtgcaaagacgattag 777
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ggctttgaagtacgacctactaaagagtgcaaagacgattag 774
>KJC_c07260
Length = 547
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 376 cattctcaacatcatcggcttgttgtcccatatgcatttggggctctatacaatcatcca 435
||||| ||||||||| |||| ||||||||||||||| ||||||| || || ||||| |||
Sbjct: 186 cattcacaacatcataggctagttgtcccatatgcaattggggcactttataatcaccca 127
Query: 436 ctagaggggcttctgcttgacaca 459
|| ||||| || |||||||||||
Sbjct: 126 ctggagggtctattgcttgacaca 103