Jatropha Genome Database
- JcCA0003212.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0003212.20 - phase: 0
(456 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03099 848 0.0
KJC_c01092 357 1e-98
KJC_c09722 167 3e-41
>KJC_c03099
Length = 730
Score = 848 bits (428), Expect = 0.0
Identities = 452/456 (99%), Gaps = 3/456 (0%)
Strand = Plus / Minus
Query: 1 atgggtcgcatgcacagtcgaggtaagggtatttcagcttccgctttgccttataagagg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 704 atgggtcgcatgcacagtcgaggtaagggtatttcagctcccgctttgccttataagagg 645
Query: 61 acaccgcccagttggctgaagatatctgctcaggatgtcgaggataacatctgcaaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 acaccgcccagttggctgaagatatctgctcaggatgtcgaggataacatctgcaaattt 585
Query: 121 gcaaagaaaggcttgactccatctcaaattggtgtcatccttcgtgattctcatggtatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gcaaagaaaggcttgactccatctcaaattggtgtcatccttcgtgattctcatggtatt 525
Query: 181 gcccaagtgaggagtgttactggtaacaagattttgcggatattgaaggcacatgggctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gcccaagtgaggagtgttactggtaacaagattttgcggatattgaaggcacatgggctt 465
Query: 241 gctcctgaaatacctgaagatttgtaccacctcatcaagaaagcagttgccattaggaaa 300
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 464 gctcctg-aatacctgaagatttgtaccacctcatcaag-aagcagttgccattaggaaa 407
Query: 301 catttggagaggaacaggaaggataaagattccaaatttaggttgattttggttgagagc 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 406 catttggagaggaacaggaaggataaagattccaaattta-gttgattttggttgagagc 348
Query: 361 aggatccaccgcctagctcgctattacaagaagacaaagaagcttccaccagtatggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aggatccaccgcctagctcgctattacaagaagacaaagaagcttccaccagtatggaaa 288
Query: 421 tatgaatcaactactgccagcacccttgtggcatag 456
||||||||||||||||||||||||||||||||||||
Sbjct: 287 tatgaatcaactactgccagcacccttgtggcatag 252
>KJC_c01092
Length = 633
Score = 357 bits (180), Expect = 1e-98
Identities = 384/452 (84%)
Strand = Plus / Plus
Query: 1 atgggtcgcatgcacagtcgaggtaagggtatttcagcttccgctttgccttataagagg 60
|||||||| ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||||
Sbjct: 59 atgggtcgtatgcacagtcgcggtaagggtatttctgcttcggctctgccttacaagagg 118
Query: 61 acaccgcccagttggctgaagatatctgctcaggatgtcgaggataacatctgcaaattt 120
|| || || || ||||| ||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 119 actcccccaagctggctcaagatctctgctcaggatgttgaggataacatttgcaaattt 178
Query: 121 gcaaagaaaggcttgactccatctcaaattggtgtcatccttcgtgattctcatggtatt 180
|| ||||| || | ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 179 gcgaagaaggggcttactccttctcagattggtgtcattcttcgtgattctcatggtatt 238
Query: 181 gcccaagtgaggagtgttactggtaacaagattttgcggatattgaaggcacatgggctt 240
|| || ||||||||||| ||||| |||||||||||||| || | ||||| ||||| |||
Sbjct: 239 gctcaggtgaggagtgtcactggaaacaagattttgcgcatccttaaggctcatggtctt 298
Query: 241 gctcctgaaatacctgaagatttgtaccacctcatcaagaaagcagttgccattaggaaa 300
|| |||||||| ||||| |||||||| || ||||||||||| || ||||| ||||||||
Sbjct: 299 gcccctgaaattcctgaggatttgtatcatctcatcaagaaggctgttgcaattaggaag 358
Query: 301 catttggagaggaacaggaaggataaagattccaaatttaggttgattttggttgagagc 360
||||||||||||||||| || ||||| |||||||| || |||||||| | || ||||||
Sbjct: 359 catttggagaggaacagaaaagataaggattccaagttcaggttgatccttgtagagagc 418
Query: 361 aggatccaccgcctagctcgctattacaagaagacaaagaagcttccaccagtatggaaa 420
|||| ||| | || ||||| || |||||||| || |||||||| || || || ||||||
Sbjct: 419 cggattcacaggcttgctcgatactacaagaaaacgaagaagctacctcctgtttggaaa 478
Query: 421 tatgaatcaactactgccagcacccttgtggc 452
|| || ||||| ||||| ||||| ||||||||
Sbjct: 479 tacgagtcaaccactgctagcacacttgtggc 510
>KJC_c09722
Length = 607
Score = 167 bits (84), Expect = 3e-41
Identities = 293/360 (81%), Gaps = 2/360 (0%)
Strand = Plus / Plus
Query: 88 gctcaggatgtcgaggataacatctgcaaatttgcaaagaaaggcttgactccatctcaa 147
||||| ||||| ||||| || |||||||| ||||||||||| ||| |||| || |||||
Sbjct: 132 gctcaagatgttgaggaaaatatctgcaagtttgcaaagaagggcctgacgccttctcag 191
Query: 148 attggtgtcatccttcgtgattctcatggtattgcccaagtgaggagtgttactggtaac 207
|| || ||||| || ||||| ||||| |||||||| || || ||||| || ||||| |||
Sbjct: 192 atcggcgtcattctccgtgactctcacggtattgctcaggtcaggagcgtaactggcaac 251
Query: 208 aagattttgcggatattgaaggcacatgggcttgctcctgaaatacctgaagatttgtac 267
||||| | || || | || || |||||| | ||||| || || || ||||||||||||
Sbjct: 252 aagatcctccgtattcttaaagctcatgggttggctccggagattccagaagatttgtac 311
Query: 268 cacctcatcaagaaagcagttgccattaggaaacatttggagaggaacaggaaggataaa 327
|| | |||||||| |||||||| ||| | || ||||||||||||||||||||||||||
Sbjct: 312 catttgatcaagaaggcagttgcgattcgcaagcatttggagaggaacaggaaggataag 371
Query: 328 gattccaaatttaggttgattttggttgagagcaggatccaccgcctagctcgctattac 387
|||||||| || ||||||| |||||| || || ||||||||| | || |||||||| |||
Sbjct: 372 gattccaagttcaggttga-tttggtggaaagtaggatccacaggctcgctcgctactac 430
Query: 388 aagaagacaaagaagcttccaccag-tatggaaatatgaatcaactactgccagcaccct 446
||||| || |||||||| || || | | |||||||| || |||||||| || ||||||||
Sbjct: 431 aagaaaaccaagaagctccctcctgttttggaaatacgagtcaactacagcaagcaccct 490