Jatropha Genome Database
- JcCA0000051.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0000051.30 + phase: 2 /pseudo/partial
(1087 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03301 1637 0.0
KJC_c07244 795 0.0
>KJC_c03301
Length = 1177
Score = 1637 bits (826), Expect = 0.0
Identities = 854/863 (98%), Gaps = 2/863 (0%)
Strand = Plus / Plus
Query: 226 atcagcaaaggtttataaaggtctcttccatctggaggag-atgtggcagtgaaaagatt 284
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 atcagcaaaggtttataaaggtctcttccatctggaggaggatgtggcagtgaaaagatt 60
Query: 285 cgagagggttaatggtatagactgtttgcgcaatcctttcaccactgagtttgcaacaat 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgagagggttaatggtatagactgtttgcgcaatcctttcaccactgagtttgcaacaat 120
Query: 345 ggtgggttgcttaaggcacaagaacttggttcagcttcaatgctgtgaggggactgagtt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtgggttgcttaaggcacaagaacttggttcagcttcaatgctgtgaggggactgagtt 180
Query: 405 agttctggttttttagttcctacccaatcaatgggagcctcnnnnnnntgatgcatttta 464
||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 agttctggttttttagttcctacccaatcaatgggagcctcaaaaaaatgatgcatttta 240
Query: 465 gcttaaattctgcagttgtcctgtcatggaagcagtttttgaatataaaataaaatttgg 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcttaaattctgcagttgtcctgtcatggaagcagtttttgaatataaaataaaatttgg 300
Query: 525 ggggttgcttctgctcttacgtatcgtcacgaagaatgcaagagacaaatcattcacaga 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggggttgcttctgctcttacgtatcgtcacgaagaatgcaagagacaaatcattcacaga 360
Query: 585 gatgtgaagccctgcaatataatgcttgatgcagatttcaatgcggggattttggtccgg 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatgtgaagccctgcaatataatgcttgatgcagatttcaatgcggggattttggtccgg 420
Query: 645 aatatttttattctggtgttccaactgtgaagactgatgtgtacagctttggggtagtgg 704
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatatttttat-ctggtgttccaactgtgaagactgatgtgtacagctttggggtagtgg 479
Query: 705 tgttagaagtgggaactgggaggaagccttttgaagatgacagaactgtggttgttgatt 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgttagaagtgggaactgggaggaagccttttgaagatgacagaactgtggttgttgatt 539
Query: 765 atgtgtggaacttgtgggaaaagaagaaactaattgaggctgctgatccaaggttgatgg 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atgtgtggaacttgtgggaaaagaagaaactaattgaggctgctgatccaaggttgatgg 599
Query: 825 ggaagtttgatgcactagagatggggaggatgctcatgctggggcttctttgtgtgcacc 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ggaagtttgatgcactagagatggggaggatgctcatgctggggcttctttgtgtgcacc 659
Query: 885 cagactatgagaagaggccaagagtaagagatgcagctaggattcttaagggagaagcac 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cagactatgagaagaggccaagagtaagagatgcagctaggattcttaagggagaagcac 719
Query: 945 cactaccatcgttgccagccagtaaaccaagggtgaggattaggcctgttttgccaaatg 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cactaccatcgttgccagccagtaaaccaagggtgaggattaggcctgttttgccaaatg 779
Query: 1005 atacagagaaaatactgaatgttgttggagatcgacccaatattgatgatgctccatatt 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 atacagagaaaatactgaatgttgttggagatcgacccaatattgatgatgctccatatt 839
Query: 1065 tgacccataggatccagtttaac 1087
|||||||||||||||||||||||
Sbjct: 840 tgacccataggatccagtttaac 862
>KJC_c07244
Length = 815
Score = 795 bits (401), Expect = 0.0
Identities = 417/420 (99%), Gaps = 3/420 (0%)
Strand = Plus / Plus
Query: 1 atggctcctggattgggaggcttaactgcatttgtggtctctgtattagcagcagttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atggctcctggattgggaggcttaactgcatttgtggtctctgtattagcagcagttgtt 412
Query: 61 gtaatctgcattttcttgacaaagaagagattcgtattgttagaaagaccagagaaggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtaatctgcattttcttgacaaagaagagattcgtattgttagaaagaccagagaaggcc 472
Query: 121 agaattgtagagttcaaacgacaaaagtcgccacaagattgtcactttttgagatcaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 agaattgtagagttcaaacgacaaaagtcgccacaagattgtcactttttgagatcaaat 532
Query: 181 cagccacaatggggttaatagagatagacttgttggggagggggcatcagcaaaggttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cagccacaatggggttaatagagatagacttgttggggagggggcatcagcaaaggttta 592
Query: 241 taaaggtctcttccatctggaggagatgtggcagtgaaaagattcgagagggttaatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 taaaggtctcttccatctggaggagatgtggcagtgaaaagattcgagagggttaatggt 652
Query: 301 atagactgtttgcgcaatcctttcaccactgagtttgcaacaat-ggtgggttgcttaag 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 653 atagactgtttgcgcaatcctttcaccactgagtttgcaacaatgggtgggttgcttaag 712
Query: 360 gcacaag--aacttggttcagcttcaatgctgtgaggggactgagttagttctggttttt 417
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gcacaaggaaacttggttcagcttcaatgctgtgaggggactgagttagttctggttttt 772