Jatropha Genome Database
- JcCA0000041.60
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0000041.60 + phase: 0 /partial
(564 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00058 954 0.0
KJC_c01273 129 8e-30
>KJC_c00058
Length = 3771
Score = 954 bits (481), Expect = 0.0
Identities = 481/481 (100%)
Strand = Plus / Minus
Query: 84 atttaataaaagttttgaatcttgggttattaattggtgtaatactagtaaatccgaaac 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3737 atttaataaaagttttgaatcttgggttattaattggtgtaatactagtaaatccgaaac 3678
Query: 144 ttttttaaatgatatccaagaaaaaagtattctagaaaaattcatagaattagaggaact 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3677 ttttttaaatgatatccaagaaaaaagtattctagaaaaattcatagaattagaggaact 3618
Query: 204 cgttcgcttggacgaaatgataaaggaatacccggaaacacatctacaagggtttcgtac 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3617 cgttcgcttggacgaaatgataaaggaatacccggaaacacatctacaagggtttcgtac 3558
Query: 264 cggaatccacaaagaaacgatccaattgatcaagatgcacaatgaagatcgtatccatac 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3557 cggaatccacaaagaaacgatccaattgatcaagatgcacaatgaagatcgtatccatac 3498
Query: 324 gattttacacttctcgacaaatataatctgtttcgttattctaagtgggtattctattct 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497 gattttacacttctcgacaaatataatctgtttcgttattctaagtgggtattctattct 3438
Query: 384 aagtaatgaagaacttattattcttaattcgtgggttcaagaattcctatataacttaag 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3437 aagtaatgaagaacttattattcttaattcgtgggttcaagaattcctatataacttaag 3378
Query: 444 cgacacaataaaagctttttcaattcttttattaaccgatttatgtataggattccactc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3377 cgacacaataaaagctttttcaattcttttattaaccgatttatgtataggattccactc 3318
Query: 504 accccacggttgggaactaatgattggctctgtctacaaagattttggatttgctcataa 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3317 accccacggttgggaactaatgattggctctgtctacaaagattttggatttgctcataa 3258
Query: 564 t 564
|
Sbjct: 3257 t 3257
>KJC_c01273
Length = 1102
Score = 129 bits (65), Expect = 8e-30
Identities = 121/139 (87%), Gaps = 6/139 (4%)
Strand = Plus / Plus
Query: 1 atgaaaagaaaagcatttattccccttctatatcttacatctatagtttttttgccctgg 60
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 970 atgaaaagaaaagcatttattccc-ttctatatcttacatctatag-ttttttgccctgg 1027
Query: 61 tggatctcnnnnnnnnnnnnnnnatttaataaaagttttgaatcttgggttattaattgg 120
|||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 1028 tggatctc---ttttttctttttatttaataaaagttttgaatcttgggttattaatt-g 1083
Query: 121 tgtaatactagtaaatccg 139
|||||||||||||||||||
Sbjct: 1084 tgtaatactagtaaatccg 1102