Jatropha Genome Database

JHL02J17r.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JHL02J17r.10 + phase: 2 /partial/short
         (121 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03863                                                            145   3e-35

>KJC_c03863 
          Length = 841

 Score =  145 bits (73), Expect = 3e-35
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcttcaaaggtttctgaggcaattaggtcacggtgtctcaatatgcgaataaatgcacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttcttcaaaggtttctgaggcaattaggtcacggtgtctcaatatgcgaataaatgcacc 316

                        
Query: 61  ttcagaggaacag 73
           |||||||||||||
Sbjct: 315 ttcagaggaacag 303