Jatropha Genome Database

JcSR397681f.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcSR397681f.10 - phase: 1 /partial
         (368 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524299|gb|FM894979.1|FM894979 FM894979 Jatropha curcas emb...   585   e-167

>gi|268524299|gb|FM894979.1|FM894979 FM894979 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000894,
           mRNA sequence
          Length = 637

 Score =  585 bits (295), Expect = e-167
 Identities = 295/295 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggagggtgaagatcacttgagagaccctaaattccagttggatgccttcagataccgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gggagggtgaagatcacttgagagaccctaaattccagttggatgccttcagataccgaa 402

                                                                       
Query: 61  catctcgactgcttcaaagtgttgctgtccgacttcgcaagcactctaaaagtcttggta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 catctcgactgcttcaaagtgttgctgtccgacttcgcaagcactctaaaagtcttggta 462

                                                                       
Query: 121 gctttggtgcttggaatcggtgcttgaatcaccttctcacacttgcagaatctcacgttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gctttggtgcttggaatcggtgcttgaatcaccttctcacacttgcagaatctcacgttg 522

                                                                       
Query: 181 aatccgtgatccttgcaaaatttattgaagctgtgcagaattgtcctgatgcaagctctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aatccgtgatccttgcaaaatttattgaagctgtgcagaattgtcctgatgcaagctctc 582

                                                                  
Query: 241 gagctgctttaaaacttgtctgtgatctttatgccttggaccggatctggaatga 295
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gagctgctttaaaacttgtctgtgatctttatgccttggaccggatctggaatga 637