Jatropha Genome Database

JcPR03AIW3S.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR03AIW3S.10 - phase: 1 /partial
         (272 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518974|gb|FM887441.1|FM887441 FM887441 Jatropha curcas emb...   432   e-122

>gi|268518974|gb|FM887441.1|FM887441 FM887441 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000642,
           mRNA sequence
          Length = 567

 Score =  432 bits (218), Expect = e-122
 Identities = 220/221 (99%)
 Strand = Plus / Plus

                                                                       
Query: 52  gcatgtcaagtgcagctgcatcaatgacttctgcagggtttcagtattttgtggatggac 111
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1   gcatgtcaagtgcagctgcatcaatgacttctgcaggntttcagtattttgtggatggac 60

                                                                       
Query: 112 ttacggaggatgcaatttctgattacagaaacttaacatctgcagctatgagaggtgaga 171
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttacggaggatgcaatttctgattacagaaacttaacatctgcagctatgagaggtgaga 120

                                                                       
Query: 172 acgatacctgcttgctctatgctgaccaattgaaacaaagatgtgttgatcagttcaaag 231
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgatacctgcttgctctatgctgaccaattgaaacaaagatgtgttgatcagttcaaag 180

                                                    
Query: 232 aaggtagtatcggtatggaacaattagctgctgttgatagt 272
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggtagtatcggtatggaacaattagctgctgttgatagt 221