Jatropha Genome Database

JcPR02I9SQ6.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR02I9SQ6.10 - phase: 2 /partial
         (355 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522359|gb|FM894504.1|FM894504 FM894504 Jatropha curcas emb...   291   3e-79

>gi|268522359|gb|FM894504.1|FM894504 FM894504 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000181,
           mRNA sequence
          Length = 540

 Score =  291 bits (147), Expect = 3e-79
 Identities = 147/147 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   cccctggtgctcctacaacccattggtatcaattacgctgtgttctgcctcagccactct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cccctggtgctcctacaacccattggtatcaattacgctgtgttctgcctcagccactct 129

                                                                       
Query: 61  atgtcatggcaggacaagaaattacaggccggctccacatggttgctcacaatgctcaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atgtcatggcaggacaagaaattacaggccggctccacatggttgctcacaatgctcaga 69

                                      
Query: 121 gttataccataaatttgacactgtcag 147
           |||||||||||||||||||||||||||
Sbjct: 68  gttataccataaatttgacactgtcag 42