Jatropha Genome Database

JcPR02FRRM3.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR02FRRM3.10 - phase: 1 /pseudo/partial
         (171 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268526378|gb|FM891634.1|FM891634 FM891634 Jatropha curcas emb...   145   2e-35

>gi|268526378|gb|FM891634.1|FM891634 FM891634 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001971,
           mRNA sequence
          Length = 374

 Score =  145 bits (73), Expect = 2e-35
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                       
Query: 30  cttgtagaaaagtttggtattgaccctaataatgcttttgcattctgggactgggttggt 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cttgtagaaaagtttggtattgaccctaataatgcttttgcattctgggactgggttggt 206

                        
Query: 90  gggaggtatagtg 102
           |||||||||||||
Sbjct: 207 gggaggtatagtg 219