Jatropha Genome Database

JcPR01C6D2I.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR01C6D2I.10 + phase: 0 /pseudo/partial
         (310 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524469|gb|FM895149.1|FM895149 FM895149 Jatropha curcas emb...   323   7e-89

>gi|268524469|gb|FM895149.1|FM895149 FM895149 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001928,
           mRNA sequence
          Length = 689

 Score =  323 bits (163), Expect = 7e-89
 Identities = 170/171 (99%), Gaps = 1/171 (0%)
 Strand = Plus / Plus

                                                                       
Query: 89  aggtaatttgtgcttttggaaggcttggaacaatgtttgggtgtgacaaatacaacatta 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aggtaatttgtgcttttggaaggcttggaacaatgtttgggtgtgacaaatacaacatta 393

                                                                       
Query: 149 aaccagaccttgtatctgtagcaaaggcgctttcttctgcatatttgccaattggaggtg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aaccagaccttgtatctgtagcaaaggcgctttcttctgcatatttgccaattggaggtg 453

                                                              
Query: 209 ttatggttagccccagaagtttcagatgttatacactcacaaagcaacaaa 259
           |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttatggttag-cccagaagtttcagatgttatacactcacaaagcaacaaa 503