Jatropha Genome Database
- JcPR01BVAYK.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcPR01BVAYK.10 + phase: 0 /partial
(193 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268521522|gb|FM896732.1|FM896732 FM896732 Jatropha curcas emb... 351 2e-97
gi|268523340|gb|FM894106.1|FM894106 FM894106 Jatropha curcas emb... 351 2e-97
gi|268524413|gb|FM895093.1|FM895093 FM895093 Jatropha curcas emb... 351 2e-97
gi|268521246|gb|FM891965.1|FM891965 FM891965 Jatropha curcas emb... 335 1e-92
gi|268522076|gb|FM892916.1|FM892916 FM892916 Jatropha curcas emb... 230 4e-61
gi|268520247|gb|FM890095.1|FM890095 FM890095 Jatropha curcas emb... 157 5e-39
gi|268516976|gb|FM892528.1|FM892528 FM892528 Jatropha curcas emb... 125 2e-29
>gi|268521522|gb|FM896732.1|FM896732 FM896732 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004022,
mRNA sequence
Length = 486
Score = 351 bits (177), Expect = 2e-97
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 1 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 191
Query: 61 acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 251
Query: 121 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaacctcaatct 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaacctcaatct 308
>gi|268523340|gb|FM894106.1|FM894106 FM894106 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_005086,
mRNA sequence
Length = 553
Score = 351 bits (177), Expect = 2e-97
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 1 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 143
Query: 61 acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 203
Query: 121 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaacctcaatct 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaacctcaatct 260
>gi|268524413|gb|FM895093.1|FM895093 FM895093 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001659,
mRNA sequence
Length = 549
Score = 351 bits (177), Expect = 2e-97
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 1 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 193
Query: 61 acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 253
Query: 121 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaacctcaatct 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaacctcaatct 310
>gi|268521246|gb|FM891965.1|FM891965 FM891965 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002392,
mRNA sequence
Length = 508
Score = 335 bits (169), Expect = 1e-92
Identities = 175/177 (98%)
Strand = Plus / Plus
Query: 1 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 168
Query: 61 acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 228
Query: 121 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaacctcaatct 177
|||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 229 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaaactccatct 285
>gi|268522076|gb|FM892916.1|FM892916 FM892916 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003626,
mRNA sequence
Length = 262
Score = 230 bits (116), Expect = 4e-61
Identities = 167/180 (92%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 1 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 60
||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 43 caaccattaccaatgtttggtgattgggatgtcattgacccagcatcagctgagggattc 102
Query: 61 aca-gtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcc 119
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 103 acatgtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgattcgcc 162
Query: 120 agcaagagataactcctcattcaagcctggcagtaacactct-tg-gaaaacctcaatct 177
| | |||||||||||||||||||||||| | ||||||| || || ||||||||||||||
Sbjct: 163 tgaatgagataactcctcattcaagcctgcctgtaacacactgtgcgaaaacctcaatct 222
>gi|268520247|gb|FM890095.1|FM890095 FM890095 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003890,
mRNA sequence
Length = 544
Score = 157 bits (79), Expect = 5e-39
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 99 aggtggaaagcctgactcgccagcaagagataactcctcattcaagcctggcagtaacac 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aggtggaaagcctgactcgccagcaagagataactcctcattcaagcctggcagtaacac 485
Query: 159 tcttggaaaacctcaatct 177
|||||||||||||||||||
Sbjct: 484 tcttggaaaacctcaatct 466
>gi|268516976|gb|FM892528.1|FM892528 FM892528 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003103,
mRNA sequence
Length = 254
Score = 125 bits (63), Expect = 2e-29
Identities = 70/71 (98%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 104 gaaagcctgactcgccagcaagagataactcctcattcaagcctggcagtaacactcttg 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gaaagcctgactcgccagcaagagataactcctcattcaagcctggcagtaacactcttg 71
Query: 164 -gaaaacctca 173
||||||||||
Sbjct: 72 tgaaaacctca 82