Jatropha Genome Database

JcCD0162764.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0162764.10 + phase: 1 /partial/short
         (143 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522532|gb|FM896536.1|FM896536 FM896536 Jatropha curcas emb...   283   2e-77

>gi|268522532|gb|FM896536.1|FM896536 FM896536 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003769,
           mRNA sequence
          Length = 595

 Score =  283 bits (143), Expect = 2e-77
 Identities = 143/143 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatggagggaatgatgagcaagcttaggagtttggacgcctatccgaaaatcaacgagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aaatggagggaatgatgagcaagcttaggagtttggacgcctatccgaaaatcaacgagg 232

                                                                       
Query: 61  acttctacagccgtacattctccggcggtgttatcactatcgcctcttctattgtcatgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 acttctacagccgtacattctccggcggtgttatcactatcgcctcttctattgtcatgc 292

                                  
Query: 121 ttctcctcttcatctctgagctc 143
           |||||||||||||||||||||||
Sbjct: 293 ttctcctcttcatctctgagctc 315