Jatropha Genome Database

JcCD0135314.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0135314.10 - phase: 0 /pseudo/partial
         (221 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521504|gb|FM894256.1|FM894256 FM894256 Jatropha curcas emb...   168   2e-42

>gi|268521504|gb|FM894256.1|FM894256 FM894256 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004562,
           mRNA sequence
          Length = 461

 Score =  168 bits (85), Expect = 2e-42
 Identities = 106/113 (93%)
 Strand = Plus / Minus

                                                                       
Query: 109 atggcagggcaggtgaaatgccacaagtatagtagacgacgtccgtctgagggttggaac 168
           |||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 272 atggcaggacaggtgaaatgccacaagtatagtagacgacgcccatctgaaggttggaac 213

                                                                
Query: 169 ttcacagtggaaaaaatgggagcacgagggaagcgcggaggtggtggtggttg 221
           ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 212 ttcacagtggagaaaatgggaccacgagggaagcgcgggggtggtggtggttg 160