Jatropha Genome Database

JcCD0102044.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0102044.10 - phase: 2 /pseudo/partial
         (269 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521464|gb|FM894216.1|FM894216 FM894216 Jatropha curcas emb...   260   7e-70

>gi|268521464|gb|FM894216.1|FM894216 FM894216 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004516,
           mRNA sequence
          Length = 617

 Score =  260 bits (131), Expect = 7e-70
 Identities = 138/139 (99%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                       
Query: 92  aggttgcagagcaacaagttactaggctttgtgaggaggcacaggaatgtatggtggtgg 151
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aggttgcagagcaacaagttactaggctttgtgaggaggcacaggaatgtatggtggtgg 186

                                                                       
Query: 152 gcagatggctggacctggcatctttaatgctcacttctgctgattttgatattttccaac 211
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 187 gcagatggctggacctggcatctttaatgctcacttctgctga-tttgatattttccaac 245

                              
Query: 212 tctaaggtctcagagaaag 230
           |||||||||||||||||||
Sbjct: 246 tctaaggtctcagagaaag 264