Jatropha Genome Database

JcCD0101804.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0101804.10 + phase: 0 /pseudo
         (365 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091308|gb|GT228735.1|GT228735 JC300 Jatropha seeds from fr...   624   e-179

>gi|262091308|gb|GT228735.1|GT228735 JC300 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.C05.scf 5', mRNA sequence
          Length = 567

 Score =  624 bits (315), Expect = e-179
 Identities = 318/319 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttggagctaaggctcgtgcaaggttcccttctcaagaaggtgctagatgcgatcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atgttggagctaaggctcgtgcaaggttcccttctcaagaaggtgctagatgcgatcaag 176

                                                                       
Query: 61  gaattggttaaagatgccaacttcgattgctcgacgactggcttctctctccaggccatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gaattggttaaagatgccaacttcgattgctcgacgactggcttctctctccaggccatg 236

                                                                       
Query: 121 gattccagccatgtcgctttggtgtctcttctccttagagcggagggctttgagcactat 180
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 237 gattccagccatgtcgctttggtgtctcttatccttagagcggagggctttgagcactat 296

                                                                       
Query: 181 cgctgtgaccgtaacctttccatgggtatgaatcttgataacatggctaagatgttaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cgctgtgaccgtaacctttccatgggtatgaatcttgataacatggctaagatgttaaag 356

                                                                       
Query: 241 tgctccggaaatgatgatatcatcaccatcaaggctgacgacggcagcgactctgtcact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgctccggaaatgatgatatcatcaccatcaaggctgacgacggcagcgactctgtcact 416

                              
Query: 301 ttcatgtttgaaagtccca 319
           |||||||||||||||||||
Sbjct: 417 ttcatgtttgaaagtccca 435