Jatropha Genome Database

JcCC0332622.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCC0332622.10 - phase: 0 
         (240 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524156|gb|FM894835.1|FM894835 FM894835 Jatropha curcas emb...   161   4e-40

>gi|268524156|gb|FM894835.1|FM894835 FM894835 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000721,
           mRNA sequence
          Length = 602

 Score =  161 bits (81), Expect = 4e-40
 Identities = 93/97 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggatctagcataaagtggaattttacgaagtttttaatcaacagggaagggcaagtc 60
           |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 470 atgggatctagcataaagtggaattttacgaagttaataatcaacagggaagggcaagtc 529

                                                
Query: 61  atcaatcgctatggcccaaccaccaatcctttgtctt 97
           ||||||||||||||||||| || ||||||||||||||
Sbjct: 530 atcaatcgctatggcccaaacaacaatcctttgtctt 566



 Score = 61.9 bits (31), Expect = 3e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 210 aggatcatatcaagaaagcattggaaattaa 240
           |||||||||||||||||||||||||||||||
Sbjct: 570 aggatcatatcaagaaagcattggaaattaa 600