Jatropha Genome Database
- JcCB0983031.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0983031.10 + phase: 1 /partial
(458 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237680874|gb|GO247086.1|GO247086 JcrME_RL0630 Expressed seque... 751 0.0
gi|237680333|gb|GO246545.1|GO246545 JcrME_RL0089 Expressed seque... 484 e-137
>gi|237680874|gb|GO247086.1|GO247086 JcrME_RL0630 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 725
Score = 751 bits (379), Expect = 0.0
Identities = 440/459 (95%), Gaps = 1/459 (0%)
Strand = Plus / Plus
Query: 1 caaagcttatgcctcttttccagcaaagatttgggtctcgaactgatgcagttctaaatc 60
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 244 caaagattatgactcttttcggtcaaagatttgggtctcgaactgatgcagttctaaatc 303
Query: 61 aactcagagaggctcttagaggtgttggtctggaattcaacatatgtgagctctttggga 120
||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||| |
Sbjct: 304 aactcagagagactcttagagatgttggtctggaattcaacatatgtgatctcattggca 363
Query: 121 attccttagaaagccataggcttatacattttgctggccagcaaggtcttgacaagcaac 180
|| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ataccttagacagccacaggcttatacattttgctggccagcaaggtcttgacaagcaac 423
Query: 181 ataatcttgcagaggaattattccttggttacttcacaaaggctaaatacattggcgaca 240
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 424 ataatcttgcagaggaattgttccttggttacttcacgaaggctaaatacattggcgaca 483
Query: 241 gggaatttctcttggaatgtgctgaaaaagttggagtagagggggctgcagaattccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gggaatttctcttggaatgtgctgaaaaagttggagtagagggggctgcagaattccttc 543
Query: 301 aagatcccaataatggtgtgaagga-ggtatatgaggacctccacaagtactcagcaggc 359
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 544 aagatcccaataatggtgtgaaggagggtatatgaggacctccacaagtattcagcaggc 603
Query: 360 ctcacaggagtcccaaactatgtgatcaatggaaagaagaagttgaatggagcccagcct 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 604 ctcacaggagtcccaaactatgtgatcaatggaaagaagaaattgaatggagcccagcct 663
Query: 420 ccagaggttttcctcagagcttttgaagctgcagcaaat 458
||||| |||||||||||||||||||||||||||||||||
Sbjct: 664 ccagaagttttcctcagagcttttgaagctgcagcaaat 702
>gi|237680333|gb|GO246545.1|GO246545 JcrME_RL0089 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 700
Score = 484 bits (244), Expect = e-137
Identities = 264/268 (98%), Gaps = 2/268 (0%)
Strand = Plus / Plus
Query: 1 caaagcttatgcctcttttccagcaaagatttgggtctcgaactgatgcagttctaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 caaagcttatgcctcttttccagcaaagatttgggtctcgaactgatgcagttctaaatc 388
Query: 61 aactcagagaggctcttagaggtgttggtctggaattcaacatatgtgagctctttggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aactcagagaggctcttagaggtgttggtctggaattcaacatatgtgagctctttggga 448
Query: 121 attccttagaaagccataggcttatacattttgctggccagcaaggtcttgacaagcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 attccttagaaagccataggcttatacattttgctggccagcaaggtcttgacaagcaac 508
Query: 181 ataatcttgcagaggaattattccttggttacttcacaaaggctaaatacattggcgaca 240
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 509 ataatcttgcagaggaattattccttggttacttc-ccaaggctaaatacattggcgaca 567
Query: 241 gggaatttctcttggaatgtgctgaaaa 268
|||||||||||||||||| ||||||||
Sbjct: 568 -ggaatttctcttggaatgggctgaaaa 594