Jatropha Genome Database

JcCB0942771.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0942771.10 + phase: 0 /pseudo/partial
         (179 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521452|gb|FM894204.1|FM894204 FM894204 Jatropha curcas emb...   230   4e-61

>gi|268521452|gb|FM894204.1|FM894204 FM894204 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004503,
           mRNA sequence
          Length = 569

 Score =  230 bits (116), Expect = 4e-61
 Identities = 119/120 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagtacggtgtcagagcagtgaagggtggaggtagatcttcagcaagggaaaccatt 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atgaagtccggtgtcagagcagtgaagggtggaggtagatcttcagcaagggaaaccatt 277

                                                                       
Query: 61  ggaagagttgcaccaggagctattgcgaagaaaattctcaagcaattttcaggaactgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggaagagttgcaccaggagctattgcgaagaaaattctcaagcaattttcaggaactgag 337