Jatropha Genome Database

JcCB0905621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0905621.10 + phase: 2 /pseudo/partial
         (536 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517324|gb|FM887266.1|FM887266 FM887266 Jatropha curcas emb...   107   1e-23

>gi|268517324|gb|FM887266.1|FM887266 FM887266 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000425,
           mRNA sequence
          Length = 541

 Score =  107 bits (54), Expect = 1e-23
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                       
Query: 92  gtatttgcaatgccagaagcttctataggacttttccctgatctaggggcatcacatttt 151
           ||||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||
Sbjct: 131 gtatttgcaatgccagaagttcatataggactttttcctgatctaggggcatcacatttt 190

                                     
Query: 152 ctttccaggattccaggatattttgg 177
           ||||| ||| |||| || ||||||||
Sbjct: 191 ctttctaggcttcctgggtattttgg 216