Jatropha Genome Database

JcCB0897541.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0897541.10 + phase: 2 /pseudo/partial
         (1272 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091293|gb|GT228720.1|GT228720 JC285 Jatropha seeds from fr...   656   0.0  
gi|237680875|gb|GO247087.1|GO247087 JcrME_RL0631 Expressed seque...   214   2e-55

>gi|262091293|gb|GT228720.1|GT228720 JC285 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL05SE.D05.scf 5', mRNA sequence
          Length = 351

 Score =  656 bits (331), Expect = 0.0
 Identities = 334/335 (99%)
 Strand = Plus / Plus

                                                                       
Query: 620 ggggaacgtggcatactacttggcgctgtccatggggttgtggaatgcttgttcagaagg 679
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17  ggggaacgtggcatactacttggcgctgtccatggggttgtggaatgcttgttcagaagg 76

                                                                       
Query: 680 tacactgagaatggaatgaatgaagatgtggcttacaagaataccgttgagagcataaca 739
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  tacactgagaatggaatgaatgaagatgtggcttacaagaataccgttgagagcataaca 136

                                                                       
Query: 740 ggaataatatcaaaaactatctcaacaaagggcatgttggctgtttataactcattatcc 799
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ggaataatatcaaaaactatctcaacaaagggcatgttggctgtttataactcattatcc 196

                                                                       
Query: 800 gatgagggaaaaagggactttgagactgcatacagtgcagcgtattatccctgtatggac 859
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gatgagggaaaaagggactttgagactgcatacagtgcagcgtattatccctgtatggac 256

                                                                       
Query: 860 attctatatgagtgttatgaagatgttgctagtggtagtgagattcgaagtgttgtgttg 919
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 257 attctatatgagtgttatgaagatgttgctagtggtagtgagattcgaagtgtcgtgttg 316

                                              
Query: 920 gctgggcgtcgattctatgaaaaggagggcctacc 954
           |||||||||||||||||||||||||||||||||||
Sbjct: 317 gctgggcgtcgattctatgaaaaggagggcctacc 351


>gi|237680875|gb|GO247087.1|GO247087 JcrME_RL0631 Expressed sequence
            tags from Jatropha curcas root cDNA library Jatropha
            curcas cDNA, mRNA sequence
          Length = 506

 Score =  214 bits (108), Expect = 2e-55
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1165 ttcactaaatccattcatgcatgcccgaggtgtctcattcatggttgataattgttcgac 1224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19   ttcactaaatccattcatgcatgcccgaggtgtctcattcatggttgataattgttcgac 78

                                                            
Query: 1225 aactgctcgattaggatcaaggaagtgggcacctcgttttgattacat 1272
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79   aactgctcgattaggatcaaggaagtgggcacctcgttttgattacat 126