Jatropha Genome Database

JcCB0892281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0892281.10 - phase: 0 /pseudo/partial
         (240 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520189|gb|FM890037.1|FM890037 FM890037 Jatropha curcas emb...   238   2e-63
gi|268523133|gb|FM894716.1|FM894716 FM894716 Jatropha curcas emb...   186   8e-48

>gi|268520189|gb|FM890037.1|FM890037 FM890037 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003825,
           mRNA sequence
          Length = 552

 Score =  238 bits (120), Expect = 2e-63
 Identities = 120/120 (100%)
 Strand = Plus / Plus

                                                                       
Query: 9   cagttgcaagtatggtgccacatgccgctacaatcatcctgataggaatgcaatcaatcc 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cagttgcaagtatggtgccacatgccgctacaatcatcctgataggaatgcaatcaatcc 492

                                                                       
Query: 69  acctgctgctgctataagtcatcccattgtagccaatcctgctgctaatttgaacattgg 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 acctgctgctgctataagtcatcccattgtagccaatcctgctgctaatttgaacattgg 552


>gi|268523133|gb|FM894716.1|FM894716 FM894716 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000554,
           mRNA sequence
          Length = 230

 Score =  186 bits (94), Expect = 8e-48
 Identities = 94/94 (100%)
 Strand = Plus / Plus

                                                                       
Query: 96  tgtagccaatcctgctgctaatttgaacattggagttattaatccagctgcctctttata 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   tgtagccaatcctgctgctaatttgaacattggagttattaatccagctgcctctttata 68

                                             
Query: 156 tcaaactattgatcctagattggctcagccaatg 189
           ||||||||||||||||||||||||||||||||||
Sbjct: 69  tcaaactattgatcctagattggctcagccaatg 102