Jatropha Genome Database

JcCB0887231.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0887231.10 + phase: 0 /partial/short
         (119 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262090645|gb|GT229003.1|GT229003 JC568 Jatropha seeds from fr...   236   4e-63
gi|268524929|gb|FM895627.1|FM895627 FM895627 Jatropha curcas emb...   236   4e-63

>gi|262090645|gb|GT229003.1|GT229003 JC568 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL12SE.F08.scf 5', mRNA sequence
          Length = 619

 Score =  236 bits (119), Expect = 4e-63
 Identities = 119/119 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttcttcacctcagtctgagatttctttcttggatttctctgattcttcacaatgggatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttcttcacctcagtctgagatttctttcttggatttctctgattcttcacaatgggatg 324

                                                                      
Query: 61  agactgagaatttcggtttggagaaatacccctcggtggagattgattgggcagctctt 119
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agactgagaatttcggtttggagaaatacccctcggtggagattgattgggcagctctt 265


>gi|268524929|gb|FM895627.1|FM895627 FM895627 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002579,
           mRNA sequence
          Length = 469

 Score =  236 bits (119), Expect = 4e-63
 Identities = 119/119 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttcttcacctcagtctgagatttctttcttggatttctctgattcttcacaatgggatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cttcttcacctcagtctgagatttctttcttggatttctctgattcttcacaatgggatg 348

                                                                      
Query: 61  agactgagaatttcggtttggagaaatacccctcggtggagattgattgggcagctctt 119
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 agactgagaatttcggtttggagaaatacccctcggtggagattgattgggcagctctt 289