Jatropha Genome Database

JcCB0843131.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0843131.10 - phase: 0 /partial
         (690 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268526355|gb|FM891611.1|FM891611 FM891611 Jatropha curcas emb...   133   3e-31

>gi|268526355|gb|FM891611.1|FM891611 FM891611 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001935,
           mRNA sequence
          Length = 530

 Score =  133 bits (67), Expect = 3e-31
 Identities = 133/155 (85%)
 Strand = Plus / Minus

                                                                       
Query: 511 atggatgcaatggcccaagctgattctactggtatgtttatatgtcctcatacaggggtg 570
           |||||||||||||| |||||||||||||| || |||||||| || || ||||| || || 
Sbjct: 389 atggatgcaatggcacaagctgattctacagggatgtttatctgcccacatacgggagtt 330

                                                                       
Query: 571 gcattgacagcattgattaagctgaggaatagtggggttataaaacctacagataggaca 630
           |||||||| ||||||| |||||| ||||||||||||||||||   ||||  |||||||||
Sbjct: 329 gcattgaccgcattgaataagcttaggaatagtggggttatagggcctatggataggaca 270

                                              
Query: 631 gtggtagtgagtactgctcatggattaaagtttac 665
           ||||| ||||| || ||||||||||| || |||||
Sbjct: 269 gtggtggtgagcacagctcatggattgaaatttac 235