Jatropha Genome Database

JcCB0832141.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0832141.10 + phase: 0 /partial
         (412 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518925|gb|FM887392.1|FM887392 FM887392 Jatropha curcas emb...   246   2e-65

>gi|268518925|gb|FM887392.1|FM887392 FM887392 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000583,
           mRNA sequence
          Length = 525

 Score =  246 bits (124), Expect = 2e-65
 Identities = 250/292 (85%)
 Strand = Plus / Plus

                                                                       
Query: 86  ttctcttcatccatggattccctgaactatggtactcctggcggcaccagatcgtggctc 145
           |||||||||||||||||||||| || ||||||||||||||||| ||||||||| | ||||
Sbjct: 116 ttctcttcatccatggattcccggagctatggtactcctggcgccaccagatccttgctc 175

                                                                       
Query: 146 tggcttctctcggttaccgagctgtggcaccggacatgagaggctacggcgacaccgatg 205
           |||||||||   |||||||||| |||||||| ||  ||||||||||||| || |||||||
Sbjct: 176 tggcttctcaatgttaccgagcagtggcacccgatttgagaggctacggtgataccgatg 235

                                                                       
Query: 206 cgccggatgatttacagagctacacttgtttccacatcgtcggcgatctaatcgggcttc 265
           |||||| ||||   |||||||||||||| ||||||||||| |||||| ||||| |||| |
Sbjct: 236 cgccggctgatccgcagagctacacttgcttccacatcgttggcgatttaatcaggctcc 295

                                                                       
Query: 266 tcgacgccgtagcaccacagcaagagaaggtttttgttgttggccatgactggggcgcat 325
           |||||||||| ||||||||||| ||||| || ||||| || |||||||| ||||| ||  
Sbjct: 296 tcgacgccgtggcaccacagcaggagaaagtatttgtagtgggccatgattggggtgccc 355

                                                               
Query: 326 acatagcttggcacttgtgtctgtttagaccagacagagtgaaagctttggt 377
            ||| |||||| || | ||  ||||||||||||| ||||| |||||||||||
Sbjct: 356 tcatcgcttggtacctttgcttgtttagaccagatagagtaaaagctttggt 407