Jatropha Genome Database

JcCB0824821.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0824821.10 - phase: 2 /partial
         (407 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523428|gb|FM893751.1|FM893751 FM893751 Jatropha curcas emb...   331   4e-91

>gi|268523428|gb|FM893751.1|FM893751 FM893751 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004662,
           mRNA sequence
          Length = 460

 Score =  331 bits (167), Expect = 4e-91
 Identities = 182/187 (97%)
 Strand = Plus / Plus

                                                                       
Query: 53  aggctggtggattggtgtttggaatactgtaaaacccaagatggtcacatgaatccaaaa 112
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 274 aggctggtggattggtgtttggaatacagtaaaacccaagatggtcacatgaatccaaaa 333

                                                                       
Query: 113 gcacatcgagttttctattctggatgtcaggccatcatgtatgtgctttgcttccgtatg 172
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gcacatcgagttatctattctggatgtcaggccatcatgtatgtgctttgcttccgtatg 393

                                                                       
Query: 173 aggtcgataatggatgttcctgggctcaaatcacatcttctcctcaaacctatggagctc 232
           |||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||
Sbjct: 394 aggtcgataatggatgttcctgcgctccaatcccatcttctcctcaaacctatggagctc 453

                  
Query: 233 atcttga 239
           |||||||
Sbjct: 454 atcttga 460