Jatropha Genome Database

JcCB0813871.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0813871.10 + phase: 0 
         (609 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525133|gb|FM895775.1|FM895775 FM895775 Jatropha curcas emb...   145   7e-35

>gi|268525133|gb|FM895775.1|FM895775 FM895775 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002757,
           mRNA sequence
          Length = 630

 Score =  145 bits (73), Expect = 7e-35
 Identities = 80/81 (98%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 417 cttgcagcagagtgcagaaaagaaggggttttcacagccaactcctgcaaatacagctgt 476
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1   cttgcagcagagtgcagaaaagaaggg-ttttcacagccaactcctgcaaatacagctgt 59

                                
Query: 477 gcccaacagctctcagaaaag 497
           |||||||||||||||||||||
Sbjct: 60  gcccaacagctctcagaaaag 80