Jatropha Genome Database
- JcCB0813641.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0813641.30 - phase: 0 /partial/short
(112 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268519673|gb|FM888140.1|FM888140 FM888140 Jatropha curcas emb... 194 1e-50
gi|268521438|gb|FM894190.1|FM894190 FM894190 Jatropha curcas emb... 194 1e-50
gi|268522872|gb|FM896315.1|FM896315 FM896315 Jatropha curcas emb... 194 1e-50
gi|268525110|gb|FM895752.1|FM895752 FM895752 Jatropha curcas emb... 194 1e-50
gi|268518721|gb|FM888964.1|FM888964 FM888964 Jatropha curcas emb... 176 3e-45
gi|268518652|gb|FM888895.1|FM888895 FM888895 Jatropha curcas emb... 163 5e-41
gi|268517572|gb|FM889283.1|FM889283 FM889283 Jatropha curcas emb... 80 5e-16
>gi|268519673|gb|FM888140.1|FM888140 FM888140 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001479,
mRNA sequence
Length = 623
Score = 194 bits (98), Expect = 1e-50
Identities = 107/110 (97%)
Strand = Plus / Plus
Query: 3 ggaattaaccagacaaatcgctccaccaactaagaacagccatgcaccaccacccataga 62
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 53 ggaattaaccagacaaatcgctccaccaactaagaacggccatgcaccaccacccataga 112
Query: 63 atcaagaaagaggtctcagtctgtcaatccttactatatctggacctggt 112
|||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 113 atcaagaaagagctctcagtctgtcaatccttactatgtctggacctggt 162
>gi|268521438|gb|FM894190.1|FM894190 FM894190 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004383,
mRNA sequence
Length = 688
Score = 194 bits (98), Expect = 1e-50
Identities = 107/110 (97%)
Strand = Plus / Plus
Query: 3 ggaattaaccagacaaatcgctccaccaactaagaacagccatgcaccaccacccataga 62
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 19 ggaattaaccagacaaatcgctccaccaactaagaacggccatgcaccaccacccataga 78
Query: 63 atcaagaaagaggtctcagtctgtcaatccttactatatctggacctggt 112
|||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 79 atcaagaaagagctctcagtctgtcaatccttactatgtctggacctggt 128
>gi|268522872|gb|FM896315.1|FM896315 FM896315 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003513,
mRNA sequence
Length = 408
Score = 194 bits (98), Expect = 1e-50
Identities = 107/110 (97%)
Strand = Plus / Minus
Query: 3 ggaattaaccagacaaatcgctccaccaactaagaacagccatgcaccaccacccataga 62
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 ggaattaaccagacaaatcgctccaccaactaagaacggccatgcaccaccacccataga 303
Query: 63 atcaagaaagaggtctcagtctgtcaatccttactatatctggacctggt 112
|||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 302 atcaagaaagagctctcagtctgtcaatccttactatgtctggacctggt 253
>gi|268525110|gb|FM895752.1|FM895752 FM895752 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002732,
mRNA sequence
Length = 455
Score = 194 bits (98), Expect = 1e-50
Identities = 107/110 (97%)
Strand = Plus / Minus
Query: 3 ggaattaaccagacaaatcgctccaccaactaagaacagccatgcaccaccacccataga 62
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 443 ggaattaaccagacaaatcgctccaccaactaagaacggccatgcaccaccacccataga 384
Query: 63 atcaagaaagaggtctcagtctgtcaatccttactatatctggacctggt 112
|||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 383 atcaagaaagagctctcagtctgtcaatccttactatgtctggacctggt 334
>gi|268518721|gb|FM888964.1|FM888964 FM888964 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002503,
mRNA sequence
Length = 582
Score = 176 bits (89), Expect = 3e-45
Identities = 95/97 (97%)
Strand = Plus / Plus
Query: 3 ggaattaaccagacaaatcgctccaccaactaagaacagccatgcaccaccacccataga 62
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 486 ggaattaaccagacaaatcgctccaccaactaagaacggccatgcaccaccacccataga 545
Query: 63 atcaagaaagaggtctcagtctgtcaatccttactat 99
|||||||||||| ||||||||||||||||||||||||
Sbjct: 546 atcaagaaagagctctcagtctgtcaatccttactat 582
>gi|268518652|gb|FM888895.1|FM888895 FM888895 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002412,
mRNA sequence
Length = 101
Score = 163 bits (82), Expect = 5e-41
Identities = 91/94 (96%)
Strand = Plus / Minus
Query: 19 atcgctccaccaactaagaacagccatgcaccaccacccatagaatcaagaaagaggtct 78
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 101 atcgctccaccaactaagaacggccatgcaccaccacccatagaatcaagaaagagctct 42
Query: 79 cagtctgtcaatccttactatatctggacctggt 112
||||||||||||||||||||| ||||||||||||
Sbjct: 41 cagtctgtcaatccttactatgtctggacctggt 8
>gi|268517572|gb|FM889283.1|FM889283 FM889283 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002908,
mRNA sequence
Length = 587
Score = 79.8 bits (40), Expect = 5e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 65 caagaaagaggtctcagtctgtcaatccttactatatctggacctggt 112
|||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 1 caagaaagagctctcagtctgtcaatccttactatgtctggacctggt 48