Jatropha Genome Database
- JcCB0813641.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0813641.20 + phase: 0 /partial/short
(66 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268517572|gb|FM889283.1|FM889283 FM889283 Jatropha curcas emb... 92 8e-20
gi|268519673|gb|FM888140.1|FM888140 FM888140 Jatropha curcas emb... 92 8e-20
gi|268521438|gb|FM894190.1|FM894190 FM894190 Jatropha curcas emb... 92 8e-20
gi|268522872|gb|FM896315.1|FM896315 FM896315 Jatropha curcas emb... 92 8e-20
gi|268525110|gb|FM895752.1|FM895752 FM895752 Jatropha curcas emb... 92 8e-20
gi|268517463|gb|FM889181.1|FM889181 FM889181 Jatropha curcas emb... 82 7e-17
>gi|268517572|gb|FM889283.1|FM889283 FM889283 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002908,
mRNA sequence
Length = 587
Score = 91.7 bits (46), Expect = 8e-20
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 1 atggtcgcaaggttgaaacttaaagaaattgacagaagggcaccaccaagagtggagcct 60
|||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 140 atggtcgcaaggctgaaacttaaaggaattgacggaagggcaccaccaggagtggagcct 81
Query: 61 gtggct 66
| ||||
Sbjct: 80 gcggct 75
>gi|268519673|gb|FM888140.1|FM888140 FM888140 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001479,
mRNA sequence
Length = 623
Score = 91.7 bits (46), Expect = 8e-20
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 1 atggtcgcaaggttgaaacttaaagaaattgacagaagggcaccaccaagagtggagcct 60
|||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 254 atggtcgcaaggctgaaacttaaaggaattgacggaagggcaccaccaggagtggagcct 195
Query: 61 gtggct 66
| ||||
Sbjct: 194 gcggct 189
>gi|268521438|gb|FM894190.1|FM894190 FM894190 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004383,
mRNA sequence
Length = 688
Score = 91.7 bits (46), Expect = 8e-20
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 1 atggtcgcaaggttgaaacttaaagaaattgacagaagggcaccaccaagagtggagcct 60
|||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 219 atggtcgcaaggctgaaacttaaaggaattgacggaagggcaccaccaggagtggagcct 160
Query: 61 gtggct 66
| ||||
Sbjct: 159 gcggct 154
>gi|268522872|gb|FM896315.1|FM896315 FM896315 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003513,
mRNA sequence
Length = 408
Score = 91.7 bits (46), Expect = 8e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1 atggtcgcaaggttgaaacttaaagaaattgacagaagggcaccaccaagagtggagcct 60
|||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 161 atggtcgcaaggctgaaacttaaaggaattgacggaagggcaccaccaggagtggagcct 220
Query: 61 gtggct 66
| ||||
Sbjct: 221 gcggct 226
>gi|268525110|gb|FM895752.1|FM895752 FM895752 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002732,
mRNA sequence
Length = 455
Score = 91.7 bits (46), Expect = 8e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1 atggtcgcaaggttgaaacttaaagaaattgacagaagggcaccaccaagagtggagcct 60
|||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 242 atggtcgcaaggctgaaacttaaaggaattgacggaagggcaccaccaggagtggagcct 301
Query: 61 gtggct 66
| ||||
Sbjct: 302 gcggct 307
>gi|268517463|gb|FM889181.1|FM889181 FM889181 Jatropha curcas
embryo 35-55 (DAF) Jatropha curcas cDNA clone
rjcfea0_002772, mRNA sequence
Length = 315
Score = 81.8 bits (41), Expect = 7e-17
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 5 tcgcaaggttgaaacttaaagaaattgacagaagggcaccaccaagagtggagcctg 61
|||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||
Sbjct: 60 tcgcaaggctgaaacttaaaggaattgacggaagggcaccaccaggagtggagcctg 4