Jatropha Genome Database

JcCB0762541.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0762541.10 + phase: 2 /partial
         (209 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524423|gb|FM895103.1|FM895103 FM895103 Jatropha curcas emb...   228   2e-60

>gi|268524423|gb|FM895103.1|FM895103 FM895103 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001672,
           mRNA sequence
          Length = 361

 Score =  228 bits (115), Expect = 2e-60
 Identities = 129/131 (98%), Gaps = 2/131 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctgatgccataaatcctggaaacacactgtatgtcactggtctatctacaaggg-tca 59
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 231 acctgatgccataaatcctggaaacacactgtatgtcactggtctatctacaaggggtca 290

                                                                       
Query: 60  cagaaagggacttagaagaacatttctctaaggagggaaaggttgcttcatg-ctttctt 118
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 291 cagaaagggacttagaagaacatttctctaaggagggaaaggttgcttcatgcctttctt 350

                      
Query: 119 gttgtggagcc 129
           |||||||||||
Sbjct: 351 gttgtggagcc 361