Jatropha Genome Database

JcCB0760911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0760911.10 - phase: 0 /partial
         (204 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523133|gb|FM894716.1|FM894716 FM894716 Jatropha curcas emb...   131   3e-31
gi|268520189|gb|FM890037.1|FM890037 FM890037 Jatropha curcas emb...    50   9e-07

>gi|268523133|gb|FM894716.1|FM894716 FM894716 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000554,
           mRNA sequence
          Length = 230

 Score =  131 bits (66), Expect = 3e-31
 Identities = 73/74 (98%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttctacatgaagactggtgaatgcaagtttggagaaaggtgcaagttccatcaccctatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ttctacatgaagactggtgaatgcaagtttggagaaaggtgcaagttccatcaccctatt 216

                         
Query: 61  aatc-gttctgcac 73
           |||| |||||||||
Sbjct: 217 aatcggttctgcac 230


>gi|268520189|gb|FM890037.1|FM890037 FM890037 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003825,
           mRNA sequence
          Length = 552

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 1   ttctacatgaagactggtgaatgcaagtttggagaaaggtgcaagttccatca 53
           ||||| |||||||||||  ||||||||||||||| ||  ||||| ||||||||
Sbjct: 179 ttctatatgaagactgggaaatgcaagtttggagcaacatgcaaattccatca 231