Jatropha Genome Database

JcCB0736441.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0736441.10 - phase: 0 /partial
         (812 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524299|gb|FM894979.1|FM894979 FM894979 Jatropha curcas emb...   488   e-138

>gi|268524299|gb|FM894979.1|FM894979 FM894979 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000894,
           mRNA sequence
          Length = 637

 Score =  488 bits (246), Expect = e-138
 Identities = 273/278 (98%), Gaps = 3/278 (1%)
 Strand = Plus / Plus

                                                                       
Query: 527 aaaagactcatgatgaacaattagttggagatgtccatgcactttcagctggccttaagg 586
           ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 2   aaaagactcatgatgaacaattagttggagatgtccatgcaccc-cagctggccttaagg 60

                                                                       
Query: 587 catatgtgacatcatatacagcaaagtcattgtctgtctgccgggaagcatgtggaggac 646
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  catatgtgacatcatatacagcaaagtcattgtctgtctgccgggaagcatgtggaggac 120

                                                                       
Query: 647 atgggtatgctgctgtcaatcggtttggtaccttgagaaatgaccatgacatttttcaga 706
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgggtatgctgctgtcaatcggtttggtaccttgagaaatgaccatgacatttttcaga 180

                                                                       
Query: 707 catttgaaggggataacacagtgctgctacaacaggtagcaggtgatctcttaaagcaat 766
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catttgaaggggataacacagtgctgctacaacaggtagcaggtgatctcttaaagcaat 240

                                                 
Query: 767 acaagggagaagttccaaggt-ggacattggcagtgac 803
           |||| |||||||||||||||| ||||||||||||||||
Sbjct: 241 acaa-ggagaagttccaaggtgggacattggcagtgac 277