Jatropha Genome Database
- JcCB0736301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0736301.10 - phase: 0 /partial
(714 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268520860|gb|FM889618.1|FM889618 FM889618 Jatropha curcas emb... 791 0.0
gi|268517602|gb|FM889313.1|FM889313 FM889313 Jatropha curcas emb... 256 3e-68
gi|268517998|gb|FM893373.1|FM893373 FM893373 Jatropha curcas emb... 80 4e-15
>gi|268520860|gb|FM889618.1|FM889618 FM889618 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003320,
mRNA sequence
Length = 552
Score = 791 bits (399), Expect = 0.0
Identities = 409/411 (99%), Gaps = 1/411 (0%)
Strand = Plus / Plus
Query: 272 ggtgctcaagggatgtggcacctgaccagaagtactgtgaaaggcactctcacaagagcc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ggtgctcaagggatgtggcacctgaccagaagtactgtgaaaggcactctcacaagagcc 201
Query: 332 gtccccgttcaagaaagcctgtggaattacacaccgactccatggctcaattgcttaatc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtccccgttcaagaaagcctgtggaattacacaccgactccatggctcaattgcttaatc 261
Query: 392 aaaaatctcacttccctaatcaaacaaactcccataatttatctatcttccgtagtccaa 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaaaatctcacttccctaatcaaacaaactcccataatttatctatcttccgtagtccaa 321
Query: 452 cggtctcagctgccgcctcatatgatcagtccaggaacttggaatggttcttgaaaggcg 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cggtctcagctgccgcctcatatgatcagtccaggaacttggaatggttcttgaaaggcg 381
Query: 512 agacagttcctgttgctagcaactccaaccaagaatggcgttatctgaaggatggcgaaa 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agacagttcctgttgctagcaactccaaccaagaatggcgttatctgaaggatggcgaaa 441
Query: 572 gggtatataattatagacaaggacagcttgactcaaactcatatttgaatatgaatttaa 631
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 442 gggtatataattatagacaaggacagcttgactcaaactcatatttgactatgaatttaa 501
Query: 632 gaggtggccacccattgcaagcccatc-gcctaaatgaaaattgcagcttg 681
||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 502 gaggtggccacccattgcaagcccatcggcctaaatgaaaattgcagcttg 552
>gi|268517602|gb|FM889313.1|FM889313 FM889313 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002944,
mRNA sequence
Length = 414
Score = 256 bits (129), Expect = 3e-68
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 3 aggagaaatgaatccgtcgtctatgaatgtggctgtccctttcacagcagctcagtggca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aggagaaatgaatccgtcgtctatgaatgtggctgtccctttcacagcagctcagtggca 345
Query: 63 agaactggagaggcagactatgatttacaagtacatgatggcctctgttcctatccctcc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agaactggagaggcagactatgatttacaagtacatgatggcctctgttcctatccctcc 405
Query: 123 agagttact 131
|||||||||
Sbjct: 406 agagttact 414
>gi|268517998|gb|FM893373.1|FM893373 FM893373 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004180,
mRNA sequence
Length = 440
Score = 79.8 bits (40), Expect = 4e-15
Identities = 109/132 (82%)
Strand = Plus / Plus
Query: 226 gatccagagccatggagatgcaaaagaacagatgggaagaaatggaggtgctcaagggat 285
|||| ||||||| || | ||||| ||||||||||||||||||||||||| ||||| |||
Sbjct: 50 gatctagagccagggcggtgcaagcgaacagatgggaagaaatggaggtgttcaagagat 109
Query: 286 gtggcacctgaccagaagtactgtgaaaggcactctcacaagagccgtccccgttcaaga 345
|| || |||||||| ||||| ||||| | || |||| | |||||||||||||||
Sbjct: 110 gtagcgcctgaccaaaagtattgtgagcgtcatatgcacagaggtcgtccccgttcaaga 169
Query: 346 aagcctgtggaa 357
||||||||||||
Sbjct: 170 aagcctgtggaa 181