Jatropha Genome Database

JcCB0696011.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0696011.10 - phase: 1 /partial
         (251 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520071|gb|FM889919.1|FM889919 FM889919 Jatropha curcas emb...   482   e-136

>gi|268520071|gb|FM889919.1|FM889919 FM889919 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003674,
           mRNA sequence
          Length = 611

 Score =  482 bits (243), Expect = e-136
 Identities = 249/251 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagaggtggctggtgaagaggagacgaacaaaaatgggagagagattgtgttagggagaa 60
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 281 aagaggtggctggtgaagaggagacgaaacaaaatgggagagagattgtgttagggagaa 340

                                                                       
Query: 61  acttgcacactgagtgtcttgaggtcacagaaccagatgctaacgatgagcacactggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 acttgcacactgagtgtcttgaggtcacagaaccagatgctaacgatgagcacactggag 400

                                                                       
Query: 121 ataaagaagcttatatggctagcgttttggctaggtatagaaagaccttgatggaaagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ataaagaagcttatatggctagcgttttggctaggtatagaaagaccttgatggaaagga 460

                                                                       
Query: 181 caaagcatcatttaggttatccttataatttggatttcgactacggtgctttaggacagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 caaagcatcatttaggttatccttataatttggatttcgactacggtgctttaggacagt 520

                      
Query: 241 tgcagcatttc 251
           |||||||||||
Sbjct: 521 tgcagcatttc 531