Jatropha Genome Database

JcCB0694581.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0694581.10 - phase: 0 /partial
         (262 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523079|gb|FM896522.1|FM896522 FM896522 Jatropha curcas emb...   420   e-118

>gi|268523079|gb|FM896522.1|FM896522 FM896522 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003754,
           mRNA sequence
          Length = 564

 Score =  420 bits (212), Expect = e-118
 Identities = 222/224 (99%), Gaps = 1/224 (0%)
 Strand = Plus / Minus

                                                                       
Query: 40  gacaatgtcgg-agtatggaatctcagagttgagaaccttgatcgatggtatctaggcca 98
           ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 564 gacaatgtcgggagtatggaatctcagagttgagaacgttgatcgatggtatctaggcca 505

                                                                       
Query: 99  tgaaacatacatgagaatcatcaatcctgaggaaaatggtgaaacagagatgggtccgcc 158
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaaacatacatgagaatcatcaatcctgaggaaaatggtgaaacagagatgggtccgcc 445

                                                                       
Query: 159 tgataatgttagatattgtggcgcccttcgttccttgcagaagactgataattctgcagc 218
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgataatgttagatattgtggcgcccttcgttccttgcagaagactgataattctgcagc 385

                                                       
Query: 219 tatctctattcttattagtaagctggaactgtatatttctctgc 262
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatctctattcttattagtaagctggaactgtatatttctctgc 341