Jatropha Genome Database

JcCB0641211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0641211.10 + phase: 0 /pseudo/partial
         (912 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091324|gb|GT228751.1|GT228751 JC316 Jatropha seeds from fr...    66   8e-11

>gi|262091324|gb|GT228751.1|GT228751 JC316 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.F02.scf 5', mRNA sequence
          Length = 702

 Score = 65.9 bits (33), Expect = 8e-11
 Identities = 141/177 (79%)
 Strand = Plus / Plus

                                                                       
Query: 496 aagggtatcaattttgatttgcctcgtgtcatccagcacgctttgccttatcctggtgtg 555
           ||||||||||||||||| ||||||| ||| || ||||| ||    |||| ||| || |||
Sbjct: 288 aagggtatcaattttgacttgcctcatgttattcagcatgcccctccttttcccggcgtg 347

                                                                       
Query: 556 gatcacgttgaaggcgacatgtttgaaagcgttccagaaggagatgccatttttatgaag 615
            | || ||||| || || ||||||||||| || ||| |||||||||||||| || | | |
Sbjct: 348 aaacatgttgagggagatatgtttgaaagtgtaccaaaaggagatgccattattctcatg 407

                                                                    
Query: 616 tggatacttcatgactggagtgatgagcactgcttgatgctgttgaagaattgctat 672
           |||||  | |||||||||  |||| |||| ||||||| | || ||||||| ||||||
Sbjct: 408 tggattttgcatgactgggatgataagcattgcttgaagttgctgaagaactgctat 464