Jatropha Genome Database

JcCB0625131.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0625131.10 - phase: 0 /partial
         (324 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518207|gb|FM888481.1|FM888481 FM888481 Jatropha curcas emb...    64   1e-10
gi|237680502|gb|GO246714.1|GO246714 JcrME_RL0258 Expressed seque...    60   2e-09

>gi|268518207|gb|FM888481.1|FM888481 FM888481 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001906,
           mRNA sequence
          Length = 272

 Score = 63.9 bits (32), Expect = 1e-10
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 136 cctggaatattattcggcatatctaatgttcaatttcctcttgcccgattgctatatcat 195
           |||||||||| |||||||||  |||||||  || |||| ||||| |  || |||||||||
Sbjct: 15  cctggaatatcattcggcatggctaatgtcgaacttccacttgcacacttactatatcat 74

                           
Query: 196 tttgattggaaacttc 211
           ||||||||||||||||
Sbjct: 75  tttgattggaaacttc 90


>gi|237680502|gb|GO246714.1|GO246714 JcrME_RL0258 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 700

 Score = 60.0 bits (30), Expect = 2e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 184 ttgctatatcattttgattggaaacttcct 213
           ||||||||||||||||||||||||||||||
Sbjct: 412 ttgctatatcattttgattggaaacttcct 441