Jatropha Genome Database

JcCB0569231.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0569231.10 - phase: 0 /partial/short
         (126 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523428|gb|FM893751.1|FM893751 FM893751 Jatropha curcas emb...   186   4e-48

>gi|268523428|gb|FM893751.1|FM893751 FM893751 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004662,
           mRNA sequence
          Length = 460

 Score =  186 bits (94), Expect = 4e-48
 Identities = 118/124 (95%), Gaps = 4/124 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   gtcttgttctatgcctgttcactaga-tcctgaaaactgtggcttgaaatttgccagaac 62
           ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 90  gtcttgtactatgccttttcactagactcctgaaaactgtggcttgaaatttgccagaac 149

                                                                       
Query: 63  gcttgcggataggtttgtttacggtgacaacccacttaccagcaggatgagttctgtggc 122
           |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||
Sbjct: 150 gcttgcggataggtttgtttacggtgacaacccacttac---caggatgagttctgtggc 206

               
Query: 123 ttat 126
           ||||
Sbjct: 207 ttat 210