Jatropha Genome Database

JcCB0551471.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0551471.10 - phase: 0 /partial
         (454 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525714|gb|FM890969.1|FM890969 FM890969 Jatropha curcas emb...   846   0.0  

>gi|268525714|gb|FM890969.1|FM890969 FM890969 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000942,
           mRNA sequence
          Length = 655

 Score =  846 bits (427), Expect = 0.0
 Identities = 427/427 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctcgctcaccgtttcgcggcggccgccgccttctctctcatcgcggctatcattttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  atgctcgctcaccgtttcgcggcggccgccgccttctctctcatcgcggctatcattttt 117

                                                                       
Query: 61  tccacaccattttctacagtgtcagctcaagcgccttctcctgctccgtttttatcacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tccacaccattttctacagtgtcagctcaagcgccttctcctgctccgtttttatcacct 177

                                                                       
Query: 121 gaacctttgaagccgttagggccattggcgccgacaccagcaacgacaacaaacgactgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gaacctttgaagccgttagggccattggcgccgacaccagcaacgacaacaaacgactgt 237

                                                                       
Query: 181 attacgccgttgcttaacatgtcggattgcttgagttatgtgcaggaaccgagcacggcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 attacgccgttgcttaacatgtcggattgcttgagttatgtgcaggaaccgagcacggcg 297

                                                                       
Query: 241 aaagttccggacaagaattgctgcccggaattggctggattggtggatagtaatcctata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aaagttccggacaagaattgctgcccggaattggctggattggtggatagtaatcctata 357

                                                                       
Query: 301 tgtttgtgtcagttgctagggaatagtagcttgacggagtcttttggtataaagattaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgtttgtgtcagttgctagggaatagtagcttgacggagtcttttggtataaagattaat 417

                                                                       
Query: 361 attaacagagctctgaagcttccttctgtttgtggtgttgaaactcctccggttagcacg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 attaacagagctctgaagcttccttctgtttgtggtgttgaaactcctccggttagcacg 477

                  
Query: 421 tgcgcag 427
           |||||||
Sbjct: 478 tgcgcag 484