Jatropha Genome Database

JcCB0549911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0549911.10 - phase: 0 
         (420 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520592|gb|FM889350.1|FM889350 FM889350 Jatropha curcas emb...   287   5e-78

>gi|268520592|gb|FM889350.1|FM889350 FM889350 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002994,
           mRNA sequence
          Length = 454

 Score =  287 bits (145), Expect = 5e-78
 Identities = 145/145 (100%)
 Strand = Plus / Plus

                                                                       
Query: 268 gggatcttctgtatgccaccatcctctattataccgcttcataatcatcctgggatgact 327
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gggatcttctgtatgccaccatcctctattataccgcttcataatcatcctgggatgact 60

                                                                       
Query: 328 gtattgagcaagcttctttatggttcattacttgtaaagtcatacgattggcttgatctc 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtattgagcaagcttctttatggttcattacttgtaaagtcatacgattggcttgatctc 120

                                    
Query: 388 cctgggtttgatgatccctctcaag 412
           |||||||||||||||||||||||||
Sbjct: 121 cctgggtttgatgatccctctcaag 145