Jatropha Genome Database

JcCB0542741.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0542741.10 + phase: 0 /partial
         (291 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525133|gb|FM895775.1|FM895775 FM895775 Jatropha curcas emb...   575   e-164

>gi|268525133|gb|FM895775.1|FM895775 FM895775 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002757,
           mRNA sequence
          Length = 630

 Score =  575 bits (290), Expect = e-164
 Identities = 290/290 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaaattgcaagaaagggatgtttgtgaagatcaatatggatggtgttcctattgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atggaaaattgcaagaaagggatgtttgtgaagatcaatatggatggtgttcctattgga 276

                                                                       
Query: 61  aggaaagtagatcttaaagcctatgacagctatgagaagctttctactgctgttgatgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aggaaagtagatcttaaagcctatgacagctatgagaagctttctactgctgttgatgaa 336

                                                                       
Query: 121 ctattcagaggcctacttgcagctcaaagagattcctctgctggtggaatcatgagcaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctattcagaggcctacttgcagctcaaagagattcctctgctggtggaatcatgagcaag 396

                                                                       
Query: 181 caagaggaagagaaagcaattacgggtgtattagatgggagtggggaatatacgcttgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 caagaggaagagaaagcaattacgggtgtattagatgggagtggggaatatacgcttgtt 456

                                                             
Query: 241 tatgaggataatgaaggagacaggatgcttgttggggatgtcccatggca 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tatgaggataatgaaggagacaggatgcttgttggggatgtcccatggca 506